Rattus norvegicus (rat): 170796
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Entry
170796 CDS
T01003
Symbol
Grin3b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B precursor
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04020
Calcium signaling pathway
rno04024
cAMP signaling pathway
rno04080
Neuroactive ligand-receptor interaction
rno04724
Glutamatergic synapse
rno05017
Spinocerebellar ataxia
rno05020
Prion disease
rno05030
Cocaine addiction
rno05031
Amphetamine addiction
rno05033
Nicotine addiction
rno05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
170796 (Grin3b)
04024 cAMP signaling pathway
170796 (Grin3b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
170796 (Grin3b)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
170796 (Grin3b)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
170796 (Grin3b)
05020 Prion disease
170796 (Grin3b)
09165 Substance dependence
05030 Cocaine addiction
170796 (Grin3b)
05031 Amphetamine addiction
170796 (Grin3b)
05033 Nicotine addiction
170796 (Grin3b)
05034 Alcoholism
170796 (Grin3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
170796 (Grin3b)
Ion channels [BR:
rno04040
]
Ligand-gated channels
Glutamate (ionotropic)
170796 (Grin3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
170796
NCBI-ProteinID:
NP_579842
RGD:
621705
Ensembl:
ENSRNOG00000012562
UniProt:
Q8VHN2
Structure
PDB
LinkDB
All DBs
Position
7:complement(10381495..10387817)
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AA seq
1002 aa
AA seq
DB search
MESVRTLWLSVALALAVGSRVVRGHPQPCRVPTRAGASVRLAALLPRAPAARARVLAALA
TPAPRLPHNLSLELVAVASPTRDPASLARGLCQVLAPPGVVASIAFPEARPELRLLQFLA
AATETPVVSVLRREVRTALGAPTPFHLQLDWASPLETILDVLVSLVRAHAWEDIALVLCR
VRDPGSLVTLWTNHASQAPKFVLDLSRLDSRNDSLRAGLALLGALEGGGTPVPAAVLLGC
STARAHEVLEAAPPGPQWLLGTPLPAEALPTTGLPPGVLALGETEQHSLEAVVHDMVELV
AQALSSMALVHPERALLPAVVNCDDLKTGGSEATGRTLARFLGNTSFQGRTGAVWVTGSS
QVHVSRHFKVWSLRRDPLGAPAWATVGSWQDGQLDFQPGAAALRVPSPSGTQARPKLRVV
TLVEHPFVFTRESDEDGQCPAGQLCLDPGTNDSARLDALFAALVNGSVPRTLRRCCYGYC
IDLLERLAEDLAFDFELYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSARSQ
VVDFTSPFFSTSLGIMVRTRDTASPIGAFMWPLHWSMWVGVFAALHLTALFLTLYEWRSP
YGLTPRGRNRGTVFSYSSALNLCYAILFGRTVSSKTPKCPTGRFLMNLWAIFCLLVLSSY
TANLAAVMVGDKTFEELSGIHDPKLHHPSQGFRFGTVWESSAEAYIKASFPEMHAHMRRH
SAPTTPHGVAMLTSDPPKLNAFIMDKSLLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQN
SPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRVFAVTETLQMGVYHFSGLFVLLCL
GLGSALLTSLGEHVFYRLVLPRIRRGNKLQYWLHTSQKIHRALNTGPPEGQQERAEQERS
GPKDELPATDGAGRWRRVRRAVERERRVRFLLEPGEAGGDRPWLCSNGPGLQAELRELEL
RIEAARERLRSALLRRGELRALLGDGTRLRPLRLLHAAPAES
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgtgcggacgctgtggctcagcgtggccctggcgctggcggtggggtcccga
gtggtgcgcggtcaccctcagccctgccgggttcccacgcgcgctggggcctccgtgcgc
ctggcggcgctcctgccccgggcgcccgccgcccgcgcccgcgtcctagctgccctggcc
acccctgcgccgcggctgccgcacaacctgagtctggaactggtggccgtcgcgtccccg
acccgggaccccgcgtcgctagctcgaggtctgtgccaggttctggcaccgcctggcgtg
gtggcctctatagcctttcccgaggcgcggcccgagctgcggctactgcagttcctggca
gccgccacagagaccccagtggtgagcgtcctgcggagggaggtgcgcacggccctcgga
gccccgactccgttccatctgcagctggactgggctagtcccctggagaccatactggat
gtgctggtgtccctggtacgggcacatgcctgggaggacattgctctagtactctgccgt
gtccgggaccctggcagcctggtgacactctggactaaccatgctagccaggctccaaag
tttgtgctggacctgagccggctggacagcaggaatgacagccttcgggctggactggcc
ctgttgggggcgctggaaggagggggaaccccagtgcctgcagcagtcctcctaggctgc
agcactgcccgtgcacatgaggtcctagaggctgcaccaccgggtccccagtggttgctg
ggcacaccattgcccgctgaggcactgcccacgactggtctgccacctggcgtgctggcg
ctgggggaaaccgaacaacactctctggaagctgtcgtccacgacatggtggagcttgtg
gctcaggcactcagtagcatggcccttgtacacccagagcgggcactgcttccagctgtg
gtgaactgtgatgacctgaaaacaggcggatctgaggcaacagggcgcaccttggctcgg
tttctcggcaacacctcatttcagggccgaacaggggccgtgtgggtgacaggctcctct
caggtgcatgtgtctcggcatttcaaggtatggagcctgcgccgggatccgctgggtgcc
ccagcctgggcaaccgtgggcagctggcaggatggacagctggacttccagccaggggca
gccgctctccgagtcccatctccgtctggcacccaggcccgaccaaagctgcgtgtggta
accctggtggaacacccgtttgtgttcaccagggaatctgatgaagacggacagtgccca
gctgggcagctgtgtctggacccaggcaccaatgactcagccaggctggatgccctcttt
gctgcactggtgaatggctcagtacctcgaacgctgagaagatgctgctatggctactgc
atcgacctgctggagcggctggccgaggacctggcctttgactttgagctctatattgtg
ggggatggcaagtacggggccctgcgtgatgggcgctggacgggcctggtgggtgacctg
ctggctggccgggcacacatggctgtgaccagcttcagcatcaactcagctcgctctcag
gtggtggatttcaccagccctttcttctccaccagcctggggattatggtgcgcacgaga
gacacggcctcgcccatcggggctttcatgtggcccctgcactggtccatgtgggtgggc
gtgtttgctgctctgcacctcacagcgctctttctcaccctgtacgaatggcgaagtccc
tacgggctcacgccgcgcggccgcaaccgtggcactgtcttctcttactcctccgcgctc
aacctgtgctatgccattctctttggacgcactgtctccagtaagacgcccaagtgccct
actggacgcttcctcatgaacctctgggcaatcttctgcctgctggtgctttccagttac
acggccaacctggctgctgtcatggttggggacaaaacctttgaggagctgtctggaatc
catgatcccaagctgcaccacccttcccaaggctttcgctttggcaccgtatgggagagc
agcgcggaggcctacatcaaggcaagcttccctgagatgcacgcacacatgcgtcggcac
agcgcacccaccactccacatggggtggccatgctcacgagcgacccgcccaagctcaac
gccttcatcatggataaatcactactggactatgaggtgtccatagatgcggactgcaag
ctgctcaccgttggcaaaccctttgctatcgagggctacggcatagggctaccccaaaac
tcgccgctcacctccaacctgtcggagttcatcagtaggtacaagtcttcaggcttcatt
gatctgctccatgacaagtggtacaagatggtgccttgcgggaagcgggtgttcgccgtg
acggagacgctgcagatgggggtctaccacttctcaggattgtttgtcctgctgtgcctc
gggctgggcagcgcgcttctcacctctctgggtgagcatgtcttctaccgcctggtgctg
ccgcgcatccgcaggggtaataagctgcagtattggcttcacacgagccagaagatccac
cgagccctcaatacaggaccacccgaggggcaacaggagagggcagagcaggagcgcagc
ggccccaaggacgagctgcctgccaccgatggtgcagggcgctggaggcgggtgcgccgg
gctgtggaacgggagcgacgcgtgcgtttcctgctggaacctggggaggctggcggagac
cgcccgtggctctgctccaacgggcccgggctgcaagcggagctgcgggagctggagctg
cgcattgaggctgcacgggagcggctgcgcagtgcgctgttgcggcgcggggagctgcgg
gccctgcttggggatggcacccggctcaggccactgcgcctgttgcatgcggcgcctgct
gagagctga
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