Rattus norvegicus (rat): 25361
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Entry
25361 CDS
T01003
Symbol
Vcam1
Name
(RefSeq) vascular cell adhesion protein 1 precursor
KO
K06527
vascular cell adhesion molecule 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04064
NF-kappa B signaling pathway
rno04514
Cell adhesion molecules
rno04668
TNF signaling pathway
rno04670
Leukocyte transendothelial migration
rno04933
AGE-RAGE signaling pathway in diabetic complications
rno05143
African trypanosomiasis
rno05144
Malaria
rno05417
Lipid and atherosclerosis
rno05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
25361 (Vcam1)
04668 TNF signaling pathway
25361 (Vcam1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
25361 (Vcam1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
25361 (Vcam1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
25361 (Vcam1)
05143 African trypanosomiasis
25361 (Vcam1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
25361 (Vcam1)
05418 Fluid shear stress and atherosclerosis
25361 (Vcam1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
25361 (Vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rno04090
]
25361 (Vcam1)
04091 Lectins [BR:
rno04091
]
25361 (Vcam1)
CD molecules [BR:
rno04090
]
Proteins
25361 (Vcam1)
Lectins [BR:
rno04091
]
I-type lectins (Siglecs)
25361 (Vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
C2-set
Ig_2
V-set
C2-set_2
Ig_6
ICAM_N
Ig_5
Ig_4
ICAM1_3_5_D2
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
25361
NCBI-ProteinID:
NP_037021
RGD:
3952
Ensembl:
ENSRNOG00000014333
UniProt:
P29534
A6HV87
LinkDB
All DBs
Position
2:complement(206723050..206742783)
Genome browser
AA seq
739 aa
AA seq
DB search
MPVKMVAIFGASTVLWILFAVSQAFKIEISPEYKTLAQIGDSMLLTCSTTGCESPSFSWR
TQIDSPLNGKVKTEGAKSVLTMDPVSFENEHSYLCTATCNSGKLERGIQVDIYSFPKDPE
IQFSGPLEVGKPVMVKCLAPDVYPIDRLEIELFKGDRLMKKQDFVDEMAKKSLETKSLEV
IFTPVIEDIEKALVCRAKLYIDQTDSIPKERETVRELQVYTSPKNTEISVHPSTRLHEGA
AVTMTCASEGLPAPEIFWSKKLDNGVLQLLSGNATLTLIAMRMEDSGIYVCEGVNLVGRD
KTEVELIVQEKPFTVDISPGSQVAAQVGDSVVLTCAAVGCDSPSFSWRTQTDSPLNGEVR
DEGATSTLTLSPVGVEDEHSYLCTVTCQRRKLEKTIQVEVYSFPEDPEIEISGPLVHGRP
VTVNCTVPNVYPFDHLEIELLKGETTLLNKFLREEIGTKSLETKSLEMTFIPTAEDTGKA
LVCLAKLHSSQMESEPKQRQSTQTLYVNVAPKEPTIWVSPSPVPEEGSPVNLTCSSDGFP
TPKILWSRQLKNGELQPLSQNTTLSFMATKMEDSGIYVCEGINEAGISKKSVELIIQGSS
KDIQLTVFPSKSVKEGDTVIISCTCGSVPEIWIILKKKAKTGDMVLKSVNGSYTIRKAQL
QDAGVYECESKTEVGSQLRSLTLDVKGKENNKDYFSPELLALYFASSLVIPAIGMIIYFA
RKANMKGSYSLVEAQKSKV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgaagatggtcgcgatcttcggagcctcaacggtactttggatactgtttgca
gtctctcaagcttttaaaatcgagatctcccctgaatacaaaacgctcgctcagattgga
gactccatgctcctgacttgcagcaccacaggctgtgagtcgccatcattctcttggaga
acccagatagacagtccactaaatgggaaggtgaagacagagggggccaagtccgttctg
accatggaccctgtcagctttgagaatgaacactcttacctgtgcacagcaacatgtaac
tctgggaaactggaaagaggaatccaagtggacatctactcattccctaaggatccagag
attcaattcagtggccccctggaggttgggaagccggtcatggtcaagtgtttggctcct
gatgtttacccaattgacagactggagatagaactgttcaagggtgaccgtctcatgaag
aaacaggattttgtagacgagatggcaaagaagtctctggaaaccaagagtttggaagtc
atctttactcctgtcattgaggatattgaaaaggctcttgtttgccgagctaaattatac
attgaccaaactgattctattcccaaagaaagggagactgtcagagaactacaagtctac
acctcccccaagaatacagagatctctgtacatccctccacaaggctacatgagggtgct
gctgtgacgatgacatgtgccagcgagggtctaccagctcctgagattttctggagcaag
aaattagataatggagttctacagctcctctcgggaaatgccaccctcaccttaattgct
atgaggatggaagattctggaatctatgtgtgtgaaggagtgaatctggttgggagagac
aaaacagaagtggaattaattgttcaagagaaaccatttactgttgacatctcccctgga
tctcaggtggctgcacaggttggggattccgttgttctgacatgtgctgctgttggctgt
gactctccctccttttcttggagaacccagacagacagtcccctcaatggggaggtgagg
gatgaaggggctacatccacactgacgctgagccctgtgggtgttgaggatgagcactct
tacctgtgcactgtgacctgtcagcgaaggaaactggagaagacaatccaagtggaggtc
tactcattccctgaagacccagaaattgaaataagtggaccacttgtacacgggagacct
gtcactgtcaactgcacggtccctaatgtgtacccctttgaccatctggagattgaacta
ctgaagggggagacaacactgttgaataaatttttaagggaggaaattggcacaaagtct
ctagagaccaaaagtttggaaatgaccttcatccccaccgctgaagacaccgggaaagct
cttgtttgcctcgctaagttacacagcagtcaaatggagtctgaacccaaacaaaggcag
agtacacagactctttatgtcaacgttgctccgaaagaacccaccatctgggttagcccc
tctcctgtcccagaggagggcagtcctgtgaacctgacctgctcaagtgatggttttcca
actcccaaaatcctgtggagcagacagctaaagaacggggaactgcagcctctttctcaa
aatacaacactctccttcatggctacaaaaatggaagattccggcatttatgtatgtgaa
gggattaatgaggctggaattagcaaaaaatcagttgaactgattatccaaggctcttcg
aaggacatacagcttacagtcttcccatctaagagcgtcaaagagggagacactgtcatt
atctcctgtacttgtggaagtgtgcccgaaatatggataattctgaaaaagaaagccaag
acaggagacatggtgctaaagtctgttaatggctcgtacaccatccgcaaggcacagctg
caggatgccggagtatacgagtgtgaatcgaaaaccgaagtcggctcgcagttgcgaagt
ttaacacttgatgtgaaaggaaaagaaaataacaaggactatttttcccctgaactcctt
gcactctactttgcatcctccttggtaatacccgccattgggatgatcatttactttgca
agaaaagccaacatgaaaggatcgtacagtctggtggaggcacagaagtcaaaagtgtag
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