Rattus norvegicus (rat): 25553
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Entry
25553 CDS
T01003
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04721
Synaptic vesicle cycle
rno04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
25553 (Slc6a4)
04721 Synaptic vesicle cycle
25553 (Slc6a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rno02000
]
25553 (Slc6a4)
Transporters [BR:
rno02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
25553 (Slc6a4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
25553
NCBI-ProteinID:
NP_037166
RGD:
3714
Ensembl:
ENSRNOG00000003476
UniProt:
P31652
A6HGX0
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Position
10:62322688..62357060
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AA seq
630 aa
AA seq
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METTPLNSQKVLSECKDREDCQENGVLQKGVPTTADRAEPSQISNGYSAVPSTSAGDEAS
HSIPAATTTLVAEIRQGERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTII
AWALYYLISSLTDRLPWTSCTNSWNTGNCTNYFAQDNITWTLHSTSPAEEFYLRHVLQIH
QSKGLQDLGTISWQLTLCIVLIFTVIYFSIWKGVKTSGKVVWVTATFPYIVLSVLLVRGA
TLPGAWRGVVFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLIVVITCVLGSLLT
LTSGGAYVVTLLEEYATGPAVLTVALIEAVAVSWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPHWSIVLGYCIGMSSVICIPTYIIYRLIST
PGTLKERIIKSITPETPTEIPCGDIRMNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttgaattctcagaaagtgctgtcagagtgtaaggacagagaggac
tgtcaagaaaatggtgttctacagaagggtgtccccaccacagcggacagggcagagcct
agccaaatatccaatgggtactctgcagtccccagcacaagtgcaggggacgaagcttca
cactcgatcccagctgccaccaccaccctggtggctgagattcgccaaggggagcgggag
acctggggcaagaagatggatttcctcctgtccgtcattggctatgccgtggacctgggc
aacatctggcggtttccttacatatgctaccagaatggcggaggggccttcctcctccct
tataccatcatggccattttcggggggatcccgctcttttacatggagctcgcactgggc
cagtaccaccgaaacgggtgcatttccatatggaggaagatctgcccgattttcaaaggc
attggttacgccatctgcatcatcgccttttacatcgcctcctactacaacaccatcata
gcctgggcgctctactacctcatctcctccctcacggaccggctgccctggactagctgc
acgaactcctggaacactggcaactgcaccaactacttcgcccaggacaacatcacctgg
acgctgcattccacgtcccccgctgaggagttctacttgcgccatgtcctgcagatccac
cagtctaagggactccaggacctgggcaccatcagctggcagctgactctctgcatcgtg
ctcatcttcaccgtaatctactttagcatctggaaaggcgtcaaaacatctggcaaggtg
gtgtgggtgacagccaccttcccatacattgtcctctctgtcctgctggtgaggggggcc
acccttcctggagcctggagaggggtcgtcttctacttgaaacccaactggcagaaactc
ttggagacaggggtgtgggtagatgccgccgctcagatcttcttctctcttggcccgggc
tttggggttctcctggcttttgctagctacaacaagttcaacaacaactgttaccaagat
gccctggtgaccagtgtggtgaactgcatgacaagcttcgtctctggcttcgtcatcttc
acggtgcttggctacatggcggagatgaggaatgaagatgtgtcagaggtggccaaagac
gcaggccccagcctcctcttcatcacgtatgcagaggcaatagccaacatgccagcatcc
acgttctttgccatcatcttcttcctcatgttaatcacgctgggattggacagcacgttc
gcaggcctggaaggtgtgatcacagctgtgctggatgagttccctcacatctgggccaag
cgcagggaatggttcgtgctcatcgtggtcatcacgtgcgtcttgggatccctgctcaca
ctgacgtcaggaggggcatacgtggtgactctgctggaggagtatgccacggggccagca
gtgctcaccgtggccctcatcgaggccgtcgccgtgtcttggttctatggaatcactcag
ttctgcagcgatgtgaaggagatgctgggcttcagcccgggatggttttggaggatctgc
tgggtggccatcagccctctgtttctcctgttcatcatttgcagttttctgatgagccca
ccccagctacggcttttccaatacaactatccccactggagtatcgtcttgggctactgc
atagggatgtcgtccgtcatctgcatccctacctatatcatttatcggctgatcagcact
ccggggacacttaaggagcgcattattaaaagtatcactcctgaaacacccacagaaatc
ccgtgtggggacatccgcatgaatgctgtgtaa
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