Rattus norvegicus (rat): 288240
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Entry
288240 CDS
T01003
Symbol
Hlcs
Name
(RefSeq) biotin--protein ligase isoform 1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00780
Biotin metabolism
rno01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
288240 (Hlcs)
Enzymes [BR:
rno01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
288240 (Hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
288240 (Hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
288240 (Hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
288240 (Hlcs)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
288240
NCBI-ProteinID:
NP_001413953
RGD:
1565360
Ensembl:
ENSRNOG00000001686
LinkDB
All DBs
Position
11:complement(46925491..47123111)
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AA seq
870 aa
AA seq
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MLITLCYLYLWARWGRRPAALVLSTVRRLRASRCSFTFCRAAAQPGGARVCLSRGGRVFC
VGESQSVDDLNKWALFLVSPFILEAEHIAFVTESIWVQGTSFQEPSSSETVVKWSDCCLP
LACRPGDPYQLIAKASVDNFSKLGVAFMEDRLQMDNGLIAQKIVSVHLKDPALKELSKAS
NKQVQAPLPSPEASLEAQPAQGVMEQAGQGDWKAAGEGPSPQRRGCAPVSESAADGDPGQ
GSTELCQLHLSSCHECLELENSTIESVRCASAENIPDLPHDCSSSVEGTAGELCPERKGK
RVNISGKAPNILLYVGSGSEEALGQLQQVRSVLTDCVDTDSYTLYHLLEDSALRDPWPDN
CLLLVIASRDPIPKGIHHRFMAYLSQGGKVLGLSSSFTFGDLRVARRDVLRNTAQNLVFS
KADGSEVRLSVLSSGYVYEEGPSLGRLQGHLENEDKDKMIVHVPFGTHGGEAILCQVHLE
LPPSAPLVQTTDDFNVLKSSNTRRLEVLKEILTALGLSCDAPQAPALTPLYLLLAAEEIQ
GPFMQWLARHVDPEGVIKSSKLSLKFVSSYTSEAEITPSSIPVVTDPEGFSSEHFNLETY
RQNLQSTRLGRVILFAEVTSTTMSLLDGLMFEMPQEMGLIAIAVRQTQGKGRGPNAWLSP
VGCALSTLLVSIPLRSQLGQRIPFVQHLMSLAVVEAVRSIPEYEDINLRVKWPNDIYYSD
LMKIGGVLVNSTLVGETFYILIGCGFNVTNSNPTICINDLIEEHNKQNKAGLKPLQADCL
IARAVTVLEKLIDRFQDQGPDGVLPLYYKYWAHSGQQVRLGSSEGPAVSIVGLDDSGFLQ
VHQEGGGVVSVHPDGNSFDMLRNLIVPKRP
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcacgctgtgttacctgtacctgtgggcgcgctgggggcgccggccggccgca
ctggtgctctccacggtgcggcggctgcgcgcctcgcgctgctccttcaccttctgccgc
gcggccgcgcagcccgggggcgcgcgcgtgtgcctgagccgcggcggccgcgtcttctgc
gtcggcgagagccagtctgttgatgacttgaacaaatgggccctgtttctcgtgtccccc
ttcatacttgaggcagaacatatagcatttgtgacagaaagcatttgggtacaaggcacc
agtttccaggagccatcgtcttcagaaaccgttgtaaaatggtcagactgctgtttgccg
ttagcttgccgccctggggatccctaccaactaattgctaaggcaagcgtggacaacttc
agcaagctgggggtggccttcatggaggacaggctccagatggataacggcctgatagcc
cagaagatcgtttcagttcacttaaaggaccctgctctgaaggaactcagcaaggcctcc
aacaaacaagtgcaggccccactcccgagcccagaggcttccctggaggcccagcctgcg
caaggtgtcatggagcaagctggtcaaggtgactggaaggctgctggtgaaggcccttcc
ccacagaggagaggctgtgcccctgtaagtgagtctgctgcagatggagatccagggcaa
ggctccactgagctctgtcagcttcacctgtccagctgccacgagtgtttggaacttgag
aacagcaccatcgagtcggtgcggtgtgcgtctgcagagaacattccagatcttccccat
gattgcagcagcagtgtggagggtactgcgggcgaactctgccctgaacggaaagggaag
agagtcaacatctcgggaaaggcgcccaacatcctgctgtacgtgggctctggttccgag
gaagccctgggccagctccagcaggtgcgatctgtcctgacagactgtgtggacacggac
agctacactctctaccacctgctggaagacagtgctctgagggacccgtggccagacaac
tgcctcctgttagtcattgccagcagggaccctatccccaaaggcatacaccacaggttc
atggcctatctttctcagggagggaaggtgctgggcctgtcttcctccttcaccttcggt
gaccttcgggtggccaggagagacgtgctacggaacacagcccagaacttggttttctct
aaggctgatgggagtgaggtacggctcagtgtcctgagcagcggctacgtttatgaggaa
ggcccgagcctcggccggctccagggccacctggagaatgaagacaaggataaaatgatt
gtgcatgtgccttttggaacccacggaggtgaagccattctctgccaggtgcatctggag
ctccccccaagcgctcccctggtgcagaccacagacgactttaatgtgctcaaatccagc
aacacgagaagactcgaggtccttaaggagatcctgactgcgctcggtctgagctgtgac
gctccacaggctcctgccttaacaccactgtacttactactggctgccgaggaaatccag
ggtccgtttatgcagtggcttgcaaggcatgtggatcctgaaggagtcataaagtccagc
aagctctcccttaagttcgtctcctcctacacatctgaagcagagatcaccccgtcttcc
atccctgtggtcaccgacccggaaggcttctcatcagagcactttaacctagagacctat
cgacagaatctgcagagcacgcgcctcgggagagtaattctgtttgcagaagtgacctct
acgaccatgagtctcctggatgggttgatgtttgagatgccgcaggaaatgggcttaatc
gccattgcagttcggcagacccagggcaaaggaaggggcccgaatgcctggctgagcccc
gtgggatgtgccctttccactctgctagtctccatccccctaaggtcacaactgggacaa
agaattccatttgtccagcatttgatgtcactggccgtggtggaggcagtgcggtctatc
ccggagtatgaggatatcaacttacgagtgaagtggcccaacgatatttattacagcgat
ctcatgaagatcggcggggttctggttaattcaacacttgtgggagaaacattttatatc
ctcattggctgtggattcaatgtgactaacagcaatcctaccatatgtatcaatgacctc
atcgaagaacacaataagcagaacaaggcaggcctgaagcccttacaagccgactgtctc
atagccagggctgtgaccgtgctggagaaactgattgacaggtttcaggaccaagggccc
gacggcgttctccccctgtattataaatactgggcgcacagtggtcagcaagtccgcctg
ggcagcagcgaggggccagcggtgtctatcgtgggtcttgatgattccgggttcctgcag
gtccaccaagagggtggtggggttgtgagcgtgcatccagatggcaactcctttgacatg
ctgaggaacctcattgtccccaagcgaccgtaa
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