KEGG   Rattus norvegicus (rat): 288240
Entry
288240            CDS       T01003                                 
Symbol
Hlcs
Name
(RefSeq) biotin--protein ligase isoform 1
  KO
K01942  biotin---protein ligase [EC:6.3.4.9 6.3.4.10 6.3.4.11 6.3.4.15]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00780  Biotin metabolism
rno01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00780 Biotin metabolism
    288240 (Hlcs)
Enzymes [BR:rno01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.9  biotin---[methylmalonyl-CoA-carboxytransferase] ligase
     288240 (Hlcs)
    6.3.4.10  biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
     288240 (Hlcs)
    6.3.4.11  biotin---[methylcrotonoyl-CoA-carboxylase] ligase
     288240 (Hlcs)
    6.3.4.15  biotin---[biotin carboxyl-carrier protein] ligase
     288240 (Hlcs)
SSDB
Motif
Pfam: BPL_LplA_LipB BPL_N BPL_C
Other DBs
NCBI-GeneID: 288240
NCBI-ProteinID: NP_001413953
RGD: 1565360
Ensembl: ENSRNOG00000001686
LinkDB
Position
11:complement(46925491..47123111)
AA seq 870 aa
MLITLCYLYLWARWGRRPAALVLSTVRRLRASRCSFTFCRAAAQPGGARVCLSRGGRVFC
VGESQSVDDLNKWALFLVSPFILEAEHIAFVTESIWVQGTSFQEPSSSETVVKWSDCCLP
LACRPGDPYQLIAKASVDNFSKLGVAFMEDRLQMDNGLIAQKIVSVHLKDPALKELSKAS
NKQVQAPLPSPEASLEAQPAQGVMEQAGQGDWKAAGEGPSPQRRGCAPVSESAADGDPGQ
GSTELCQLHLSSCHECLELENSTIESVRCASAENIPDLPHDCSSSVEGTAGELCPERKGK
RVNISGKAPNILLYVGSGSEEALGQLQQVRSVLTDCVDTDSYTLYHLLEDSALRDPWPDN
CLLLVIASRDPIPKGIHHRFMAYLSQGGKVLGLSSSFTFGDLRVARRDVLRNTAQNLVFS
KADGSEVRLSVLSSGYVYEEGPSLGRLQGHLENEDKDKMIVHVPFGTHGGEAILCQVHLE
LPPSAPLVQTTDDFNVLKSSNTRRLEVLKEILTALGLSCDAPQAPALTPLYLLLAAEEIQ
GPFMQWLARHVDPEGVIKSSKLSLKFVSSYTSEAEITPSSIPVVTDPEGFSSEHFNLETY
RQNLQSTRLGRVILFAEVTSTTMSLLDGLMFEMPQEMGLIAIAVRQTQGKGRGPNAWLSP
VGCALSTLLVSIPLRSQLGQRIPFVQHLMSLAVVEAVRSIPEYEDINLRVKWPNDIYYSD
LMKIGGVLVNSTLVGETFYILIGCGFNVTNSNPTICINDLIEEHNKQNKAGLKPLQADCL
IARAVTVLEKLIDRFQDQGPDGVLPLYYKYWAHSGQQVRLGSSEGPAVSIVGLDDSGFLQ
VHQEGGGVVSVHPDGNSFDMLRNLIVPKRP
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgctcatcacgctgtgttacctgtacctgtgggcgcgctgggggcgccggccggccgca
ctggtgctctccacggtgcggcggctgcgcgcctcgcgctgctccttcaccttctgccgc
gcggccgcgcagcccgggggcgcgcgcgtgtgcctgagccgcggcggccgcgtcttctgc
gtcggcgagagccagtctgttgatgacttgaacaaatgggccctgtttctcgtgtccccc
ttcatacttgaggcagaacatatagcatttgtgacagaaagcatttgggtacaaggcacc
agtttccaggagccatcgtcttcagaaaccgttgtaaaatggtcagactgctgtttgccg
ttagcttgccgccctggggatccctaccaactaattgctaaggcaagcgtggacaacttc
agcaagctgggggtggccttcatggaggacaggctccagatggataacggcctgatagcc
cagaagatcgtttcagttcacttaaaggaccctgctctgaaggaactcagcaaggcctcc
aacaaacaagtgcaggccccactcccgagcccagaggcttccctggaggcccagcctgcg
caaggtgtcatggagcaagctggtcaaggtgactggaaggctgctggtgaaggcccttcc
ccacagaggagaggctgtgcccctgtaagtgagtctgctgcagatggagatccagggcaa
ggctccactgagctctgtcagcttcacctgtccagctgccacgagtgtttggaacttgag
aacagcaccatcgagtcggtgcggtgtgcgtctgcagagaacattccagatcttccccat
gattgcagcagcagtgtggagggtactgcgggcgaactctgccctgaacggaaagggaag
agagtcaacatctcgggaaaggcgcccaacatcctgctgtacgtgggctctggttccgag
gaagccctgggccagctccagcaggtgcgatctgtcctgacagactgtgtggacacggac
agctacactctctaccacctgctggaagacagtgctctgagggacccgtggccagacaac
tgcctcctgttagtcattgccagcagggaccctatccccaaaggcatacaccacaggttc
atggcctatctttctcagggagggaaggtgctgggcctgtcttcctccttcaccttcggt
gaccttcgggtggccaggagagacgtgctacggaacacagcccagaacttggttttctct
aaggctgatgggagtgaggtacggctcagtgtcctgagcagcggctacgtttatgaggaa
ggcccgagcctcggccggctccagggccacctggagaatgaagacaaggataaaatgatt
gtgcatgtgccttttggaacccacggaggtgaagccattctctgccaggtgcatctggag
ctccccccaagcgctcccctggtgcagaccacagacgactttaatgtgctcaaatccagc
aacacgagaagactcgaggtccttaaggagatcctgactgcgctcggtctgagctgtgac
gctccacaggctcctgccttaacaccactgtacttactactggctgccgaggaaatccag
ggtccgtttatgcagtggcttgcaaggcatgtggatcctgaaggagtcataaagtccagc
aagctctcccttaagttcgtctcctcctacacatctgaagcagagatcaccccgtcttcc
atccctgtggtcaccgacccggaaggcttctcatcagagcactttaacctagagacctat
cgacagaatctgcagagcacgcgcctcgggagagtaattctgtttgcagaagtgacctct
acgaccatgagtctcctggatgggttgatgtttgagatgccgcaggaaatgggcttaatc
gccattgcagttcggcagacccagggcaaaggaaggggcccgaatgcctggctgagcccc
gtgggatgtgccctttccactctgctagtctccatccccctaaggtcacaactgggacaa
agaattccatttgtccagcatttgatgtcactggccgtggtggaggcagtgcggtctatc
ccggagtatgaggatatcaacttacgagtgaagtggcccaacgatatttattacagcgat
ctcatgaagatcggcggggttctggttaattcaacacttgtgggagaaacattttatatc
ctcattggctgtggattcaatgtgactaacagcaatcctaccatatgtatcaatgacctc
atcgaagaacacaataagcagaacaaggcaggcctgaagcccttacaagccgactgtctc
atagccagggctgtgaccgtgctggagaaactgattgacaggtttcaggaccaagggccc
gacggcgttctccccctgtattataaatactgggcgcacagtggtcagcaagtccgcctg
ggcagcagcgaggggccagcggtgtctatcgtgggtcttgatgattccgggttcctgcag
gtccaccaagagggtggtggggttgtgagcgtgcatccagatggcaactcctttgacatg
ctgaggaacctcattgtccccaagcgaccgtaa

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