Rhodococcus opacus PD630: Pd630_LPD03034
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Entry
Pd630_LPD03034 CDS
T03071
Name
(GenBank) Uncharacterized protein yjjA
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa00860
Porphyrin metabolism
roa01100
Metabolic pathways
roa01110
Biosynthesis of secondary metabolites
roa01120
Microbial metabolism in diverse environments
roa01240
Biosynthesis of cofactors
Module
roa_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
roa_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Pd630_LPD03034
Enzymes [BR:
roa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
Pd630_LPD03034
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Gene cluster
GFIT
Motif
Pfam:
HEM4
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
AHK30257
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Position
3229751..3230908
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AA seq
385 aa
AA seq
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MNDDTPLCGFTIGITASRRAEEFATLLTRRGATVVHAPAIRIIPLADDTELERVTRQIID
NPPEIVVATTGIGFRGWMEAADGWGEAEELGRALASSRLLARGPKAKGAIRAADLREEWS
PASESSAEVLDHLLGEGVEGKRIAVQLHGATTEWEPVADFCEVLRCAGADVIAVPVYRWT
ALEDQAPMDRMIELIASGGLDAVSFTSAPAVASLLTRAKETGMIEMVLHSFRHRVLAACV
GPVTAGPLRELEVPTTMPARSRLGALARHIADELPRRANKIQTAGHELSIRGGCVVVDGE
VRQLPPAAMSLMRTLGARPGRVVPRDELLAALPGGGGDTHAVETAVARLRASLGAPKAVQ
TVVKRGYRLALDPVDCVDSREEGQQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacgacacgccgctgtgcgggttcacgatcggaatcacggcgtcccggcgtgcg
gaagagttcgccacgctgctgacgcggcgtggtgccaccgtggtgcacgccccggccatc
cgcatcatcccgctggccgacgacacggaactcgagcgcgtcacgcgccagatcatcgac
aacccgccggagatcgtcgtcgcgacgacggggatcggcttccgcggctggatggaggcc
gcggacggctggggcgaagcggaggagctgggccgggcactggcctcgagcagactgctg
gcccgcggacccaaggcgaagggcgcgatccgggccgcggacctgcgggaagagtggtca
cccgcctcggagtcgtcggcggaggtgctcgatcacctgctcggtgagggcgtcgaagga
aagcgcatcgcggtccagttgcacggcgccaccacggaatgggagccggtcgcggacttc
tgcgaggtgctccgctgtgcgggcgccgacgtgatcgccgtccccgtctaccggtggacg
gcgctcgaggaccaggccccgatggaccggatgatcgaactgatcgcctccggcgggctc
gacgcggtcagcttcaccagcgcaccggcggtggcctcgctgctgacccgcgccaaggag
accggaatgatcgagatggtgctgcattcgttccggcaccgagttctcgcggcctgcgtg
ggaccggtgaccgctggaccgctgcgcgaactcgaggtgccgacgacgatgccggcgcgc
tcgcggctgggggcactcgcccggcacatcgccgacgagctgccgaggcgggcgaacaag
atccagaccgccggacacgaattgagcatccggggcggctgcgtcgtcgtcgacggcgag
gtgcggcagctgccccccgccgcgatgtcgctgatgcgcacgctcggcgcccggcccggc
cgggtcgttccgcgggacgaactgctcgcggcgctgcccggtggcggcggcgacacccac
gccgtggagacggccgtggctcggctgcgggcgtccctgggcgcaccgaaagccgtccag
acggtggtcaagcggggataccgcctcgctctcgaccccgtcgactgcgtcgattcacgt
gaggagggacagcaatga
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