Rhodococcus opacus PD630: Pd630_LPD03115
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Entry
Pd630_LPD03115 CDS
T03071
Name
(GenBank) Glycogen operon protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa00500
Starch and sucrose metabolism
roa01100
Metabolic pathways
roa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Pd630_LPD03115
Enzymes [BR:
roa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Pd630_LPD03115
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
GHL5
Motif
Other DBs
NCBI-ProteinID:
AHK30336
LinkDB
All DBs
Position
complement(3310547..3312601)
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AA seq
684 aa
AA seq
DB search
MRGTGTQFAVHAPDAELVQVCLISEGGDETRIDLVQRTYGIWHGIVEGVGAGQRYGYRAH
GRWDPARGVRLNPAKLLLDPWATRITGELGDHDALVSHDGDPFGGPSRVDSLGHTPLSVV
TADHARTNGPRIERPWEETVVYELHVGSFTARHPDVPPQYRGTYLGLAEPAVVGHLVRLG
VTAVELLPVQAYVSEATVRSRGMRNHWGYSTAAFFAPHPGYAVVPGEEITEFHTMVDALH
AAGIEVVLDVVYNHTCEQGVDGISLSWRGLDAPGYYLLDSDGRDIDLTGCGNTVDAQSPV
AVRMIGDSLRYWTHDMGVDGFRFDLASALGRPGGGRFDSRASIFSAITADPVLSRCKLIA
EPWDATSDGYRVGHFGVQWSEWNDKYRNTVRRFWNGGTGVRDLASRVAGSEDVFGNRRPW
ASVNFVTAHDGFTAADLVSYDRKHNEANGEDNRDGADHNDSADHGVEGPTDDPSIIEARS
RHVRALLATLALSTGTPMFTAGDEFGHTLGGNNNAYCVPEDTPREDSWPLDWSTGDTSLT
AFVTRALDLRRASPALRQPEFFEGRRTPTGHPDLVWFGADGAEMDDPAWYDDSRRTLQAW
IDGSDIRSHTEDGHQLTDDSWLLVLHSGGPTVITLGCPEWFYGTVLAEFDSASPDGAPAP
GGPISGDSTIALSGPTLLVFRAVG
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtggcaccggaacgcagttcgcggttcacgctcccgacgccgaactggtacaggtg
tgcctgatttccgagggcggcgacgagacgcggatcgatctggtccagcggacgtacggc
atctggcacggcatcgtcgagggggtcggtgcgggacagcgctacggttaccgcgcgcac
gggcgctgggaccccgcacgcggcgtgcgcctcaaccccgccaagctgcttctggatccg
tgggcgacccgcatcacgggcgaactcggcgaccacgacgcactggtctcccacgacggc
gacccgttcggcggtccgtcgcgcgtcgacagcctgggccacaccccgctgtcggtggtg
acggccgaccacgcccgcacgaacggaccgcggatcgaaaggccctgggaggaaaccgtt
gtctacgaacttcacgtgggatcgttcaccgcacggcaccccgacgtgccaccgcagtac
cgcggaacgtatctgggtctcgcggaacccgccgtcgtcggtcatctcgtccgcctcggg
gtgaccgcggtcgaactgcttcccgtccaggcgtacgtctccgaggccaccgtccgctcg
cggggcatgcgcaaccactggggatactccaccgcggcgttcttcgctccccacccgggc
tatgcggtggtgcccggtgaggagatcaccgaattccacacgatggtcgacgcgctgcac
gccgcggggatcgaggtcgtcctcgacgtggtgtacaaccacacctgcgagcagggcgtc
gacggcatcagcctcagctggcgcggcctcgacgcccccggctactacctcctcgactcc
gacggtcgcgacatcgatctcaccggttgcgggaacaccgtcgacgcacagtcgcccgtc
gccgtccggatgatcggcgacagcctgcgctactggacgcacgacatgggcgtcgacggc
ttccggttcgacctcgcgtccgctctcggccggcccggtggcggccgattcgattcccgc
gcttcgatcttctccgcaatcacggcggatcccgttctctcccggtgcaaactgatcgcc
gaaccgtgggacgccacttcggacggatatcgggtcgggcacttcggcgttcagtggtcg
gaatggaacgacaagtaccgcaacaccgttcgacggttctggaacggcggcaccggggta
cgcgatctcgcctcccgggtggcgggttccgaggacgtattcggaaaccggcggccgtgg
gcgtccgtcaatttcgtgaccgcgcacgacgggttcaccgccgcggacctcgtgtcgtac
gaccgcaaacacaacgaggccaacggcgaggacaaccgggacggcgccgatcacaacgac
tccgccgaccacggcgtcgaaggtcccaccgacgatccgtcgatcatcgaggcgcggtcc
cggcacgtccgcgcgctcctcgccacgctcgcactgtcgaccggcacgccgatgttcacc
gcaggcgacgagttcggtcacaccctcggcggcaacaacaacgcgtactgcgtccccgag
gacacccctcgtgaagactcctggccactcgactggagcaccggggacacgagtctcacc
gcattcgtcacccgcgccctcgacctccgacgcgcctcccccgcgctgcgccagccggaa
ttcttcgagggcaggcgcacacccaccggccatcccgacctcgtgtggttcggcgccgac
ggcgcggagatggacgaccccgcgtggtacgacgactccaggcgcaccctccaggcgtgg
atcgacggatccgacatccgctcccacaccgaagacgggcaccagctcaccgacgacagc
tggcttctcgtcctccactcgggcggacccaccgtgatcacgctgggctgtcccgaatgg
ttctacggcacggtgctcgccgaattcgactcggcgtcccccgacggcgcacccgcgccg
ggcggcccgatctccggagactccacgatcgcactgtccggtccgacgctgctcgtcttc
cgtgcggtcgggtag
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