Roseovarius sp. THAF27: FIU89_18910
Help
Entry
FIU89_18910 CDS
T06352
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
roh
Roseovarius sp. THAF27
Pathway
roh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FIU89_18910 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
roh01007
]
FIU89_18910 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
roh03016
]
FIU89_18910 (lysS)
Enzymes [BR:
roh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FIU89_18910 (lysS)
Amino acid related enzymes [BR:
roh01007
]
Aminoacyl-tRNA synthetase
Class I (A)
FIU89_18910 (lysS)
Transfer RNA biogenesis [BR:
roh03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FIU89_18910 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
tRNA-synt_1
tRNA-synt_1c
tRNA-synt_1e
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
QFT82706
UniProt:
A0A5P9H413
LinkDB
All DBs
Position
complement(3778760..3780334)
Genome browser
AA seq
524 aa
AA seq
DB search
MSELRDAAMSAKAWPFEEARRLLKRYEKAPPEKGYVLFETGYGPSGLPHIGTFGEVLRTT
MIRHAFQQISDIPTRLFCFSDDLDGMRKVPGNVPNQDMLQEHLQKPLTSVPDPFGEFESF
GHHNNAMLRRFLDTFGFEYEFYSATDFYKSGQFDETLLRAAERYDDIMKVMLKSLREERQ
QTYSIFLPLHPETGRVLYVPMKNVDAAKGEITFDDEDGREWTLPVTGGNVKLQWKPDFGA
RWAALGVDFEMYGKDHSTNTPIYDKICEILGTPAPEHFTYELFLDDKGQKISKSSGNGIS
IDEWLTYASTESLSYFMYQKPKTAKRLFFDVIPRAVDEYHQQLRAYPGQDAAGKLNNPVH
HIHNGDVPESRMVVSFAMLLNLASVASAQDKETLWGFINRYAPDASPETHPDLDAAAGFA
VKYYEDFVAPTKTYRAPTELEREALTDLRDQLAAYDGPVEDEALQSVVYAVGRDRFDPLR
DWFKALYETLLGASQGPRFGGFIALYGVDETVALIDRALAGELA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaactgcgcgacgccgcgatgagtgcgaaagcctggcccttcgaagaggcgcgc
cggctgctcaaacgctatgaaaaggcgccgcccgagaagggatatgtcctgttcgagacc
ggctatggcccctcgggcctgccgcatatcgggaccttcggcgaggttctgcgcacaacg
atgatccgccacgcgtttcagcagatcagcgatatcccgacgcggctcttttgtttctcc
gacgacctggacgggatgcgcaaggtgccgggcaacgtgccgaaccaggacatgttgcaa
gagcatctgcagaaaccgctgaccagcgtgccggacccctttggcgagttcgagagcttt
ggccatcacaacaacgccatgctgcgccggttcctggataccttcgggttcgagtacgaa
ttctattcggccaccgatttctacaagtccgggcagttcgacgagacgctgctgcgcgcg
gcagagcggtacgacgacatcatgaaggtgatgctgaaaagcttgcgcgaggagcggcag
cagacctattcgatcttcctgcctttacaccccgagacggggcgtgtcctttacgtgccg
atgaagaatgtcgatgccgccaagggcgagatcacgttcgacgacgaggatggccgcgaa
tggaccctgccggttacggggggcaacgtgaagctgcaatggaaacccgatttcggcgcg
cgctgggccgcattgggcgtcgatttcgagatgtacggcaaggaccattccaccaacacg
ccgatctacgacaagatctgcgagatcctgggcacgcccgcgcccgagcatttcacctat
gaactgttccttgatgacaaggggcagaagatctccaaatcgtcgggcaacgggatcagc
atcgacgagtggctgacctatgccagcaccgagagcctgtcctatttcatgtaccagaag
ccgaagacggccaagcggctgttctttgacgtgatcccgcgcgcggtggacgagtatcac
cagcaattgcgcgcctatccggggcaggatgcggcgggcaagctgaacaacccggtgcat
cacatccacaatggcgacgtgcccgaaagccgcatggtggtgtccttcgccatgctgctg
aacctcgcctcggtggcgtccgcgcaggacaaggaaacgctctggggcttcatcaatcgc
tatgcgcccgatgccagccccgagacgcatcccgatctggatgccgccgccgggttcgcg
gtgaaatactacgaggatttcgtcgcgccgacgaagacctatcgcgcccccacggagctg
gaacgcgaggcgctgaccgacctgcgcgaccagttggccgcctatgacggcccggtcgag
gacgaggcgctgcaatcggtggtctatgccgtcgggcgcgaccggttcgatccgctgcgc
gactggttcaaggcgctctacgagacgctgcttggcgccagccaggggccgcgctttggc
gggttcatcgcgctttatggtgttgacgaaaccgtggcgctgatcgaccgtgcgctggcg
ggcgagctggcttga
DBGET
integrated database retrieval system