Roseovarius sp. AK1035: RAK1035_3777
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Entry
RAK1035_3777 CDS
T05517
Name
(GenBank) Geranylgeranyl pyrophosphate synthetase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rok
Roseovarius sp. AK1035
Pathway
rok00900
Terpenoid backbone biosynthesis
rok01100
Metabolic pathways
rok01110
Biosynthesis of secondary metabolites
Module
rok_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RAK1035_3777
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rok01006
]
RAK1035_3777
Enzymes [BR:
rok01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
RAK1035_3777
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
RAK1035_3777
2.5.1.29 geranylgeranyl diphosphate synthase
RAK1035_3777
Prenyltransferases [BR:
rok01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RAK1035_3777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AWZ22482
LinkDB
All DBs
Position
complement(3895834..3896703)
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AA seq
289 aa
AA seq
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MPIETRIEAAIAQAIARGQAGQTPARLADALDYSTSPGGARIRPTILMSVALACGDDRPE
LSDAAAAALEIMHCASLVHDDLPCFDDADLRRGKPSVHRAYSEPLAVLAGDALIIMSFEI
LARVAECDAARANALILALARRSGMPNGICAGQGWESEPTVDLEAYHRSKTGALFIAATQ
MGAIAAGHEPEPWYELGARIGAAFQVADDLRDALLDAETLGKPVGQDDLHGRPNAVSELG
VAGAVTRLKDILAGAISSIPSCPGEARLAKMVQMQAERIISVLPARMRA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcccattgagacccgcattgaagcggccatagcgcaggcgattgcgcgggggcaggcg
gggcagaccccggcccgattggcggatgccctcgattattccaccagccccggcggcgcg
cgcatacgtccgacgattctcatgtctgtggcgctggcctgcggcgatgatcgccctgaa
ttgagcgatgccgccgctgccgcgctggaaatcatgcattgtgcaagccttgtgcatgac
gatttgccgtgtttcgatgatgccgatttgcggcgcggcaagccttcggtgcatcgcgcc
tattccgaaccgctggcggtgctggcgggtgatgcgcttatcatcatgtcgtttgaaatt
cttgcccgagtggcagagtgcgatgcggcgcgcgccaatgcgctgattctggcgctggcg
cggcgcagtggcatgccaaacggcatttgtgccgggcagggctgggagagtgagccgacc
gttgatctggaggcctatcaccgttccaagaccggcgcgctctttattgccgccacgcag
atgggggccatcgcggcggggcacgagcccgagccgtggtatgagctgggcgcgcgcatt
ggcgccgcgtttcaggtggcggatgatctgcgcgatgcgcttttggatgccgaaaccttg
ggcaagccggtggggcaggatgatctgcacgggcggcccaatgccgtatcggaattgggt
gtggccggggctgtgacgcggctcaaggatattctggcaggggcgatttcgtcgattccg
tcctgtcccggcgaggcgcggctggccaagatggtgcagatgcaggccgaacgcattatc
tcggtgctgcctgcgcgcatgcgggcctga
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