Roseovarius sp. AK1035: RAK1035_3888
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Entry
RAK1035_3888 CDS
T05517
Name
(GenBank) Succinyl-CoA ligase, ADP-forming beta chain
KO
K14067
malate-CoA ligase subunit beta [EC:
6.2.1.9
]
Organism
rok
Roseovarius sp. AK1035
Pathway
rok00630
Glyoxylate and dicarboxylate metabolism
rok00680
Methane metabolism
rok01100
Metabolic pathways
rok01120
Microbial metabolism in diverse environments
rok01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RAK1035_3888
09102 Energy metabolism
00680 Methane metabolism
RAK1035_3888
Enzymes [BR:
rok01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.9 malate---CoA ligase
RAK1035_3888
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
GARS_A
Succ_CoA_lig
Motif
Other DBs
NCBI-ProteinID:
AWZ22593
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Position
4013927..4015102
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AA seq
391 aa
AA seq
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MFLAEYQSKELLAQYGVLAPDGRPARSPDEAQRLCKEIDARKYVVKAQIGAGGRGLAGGI
RFAATPSAVADEARRLLGSTLVTDQTGPAGETVTLVQIEAAIDIAQSCFVAIAFDPETGQ
PMLLASGAGGVEFEQRARMDEDTAQSCPLPSDSPEARAKIAPFLTGVGISEAQDAAIDAI
FAARLAFTENDMTLIEINPFARTTDGRWMAVDAKVAIDPNAGFRRPEFASMVADRPAPAD
ELAAQKHNINLVRLEGNIGVVANGAGLGLATNDMITDAGGKAANFMDIRTTASSMDVARG
VEILLADDRVSAILLTIHGGGMTSADTVAEGVNFAYAKATRKLPVIAYISGKHADWGHRI
LRERKVPVESCDTLSAAVGRVVELAGQRRAR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcgccgaatatcagtctaaagagctgctcgcgcaatatggcgtgcttgccccc
gacgggcgtcccgcgcgtagcccggacgaagcgcaacgcctgtgcaaggaaattgacgcg
cgaaaatacgtggtgaaggcccagatcggcgcaggtgggcgcgggcttgctgggggtatc
cgctttgccgcgacgccctctgccgtggctgacgaggcgcgccgccttcttggatcgacc
ctagtaacagaccagaccggaccggcaggagagaccgtaaccctcgtgcagatcgaggcg
gcgattgacatcgcacaaagctgtttcgtcgccatcgcctttgacccggaaacagggcag
cccatgcttttggcctcgggtgcgggcggggtggaattcgagcagcgcgcccgcatggac
gaggacacggctcaaagctgcccgctaccttcggatagccccgaggcgcgcgccaagatt
gcaccctttctgactggtgtcgggatcagcgaagcgcaagacgcggccatcgacgcgatc
tttgccgcccgcctcgcctttaccgaaaacgacatgacacttatcgaaatcaatcccttt
gcccgaacgaccgatggccgctggatggccgtggatgccaaggttgcgattgatccaaac
gccggctttcgccgccccgaattcgcctccatggtcgcggaccgtcccgcaccagcggat
gagttggccgcgcagaaacacaatatcaacctagtacggctcgaggggaacatcggcgtt
gttgccaatggcgcggggcttggccttgctactaatgacatgatcacagacgctggcggc
aaggctgcaaacttcatggatatccgcacgaccgcgagcagtatggatgtggcgcgcggg
gtcgagatacttctcgccgatgatcgagtatcggcgatcctgctcaccattcacggcggc
ggcatgacctctgccgatacggtagccgaaggcgtaaactttgcctatgctaaagccacg
cggaagctgccggtgattgcctatatctcggggaaacatgccgattggggccaccgcatc
ctgcgcgaacgcaaagtgccggttgagagctgcgacacgctgtcggctgcggttggacgg
gtagtagagctggcaggccagaggagggcacgctga
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