Raoultella ornithinolytica S12: TE10_01510
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Entry
TE10_01510 CDS
T03629
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ron
Raoultella ornithinolytica S12
Pathway
ron00540
Lipopolysaccharide biosynthesis
ron01100
Metabolic pathways
ron01250
Biosynthesis of nucleotide sugars
Module
ron_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
TE10_01510 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ron01005
]
TE10_01510 (rfaD)
Enzymes [BR:
ron01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
TE10_01510 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ron01005
]
Core region
TE10_01510 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
AJF70819
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All DBs
Position
321265..322230
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AA seq
321 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQV
MAGEEFGDEIEAVFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAAT
YGGRTSNFIESREYEQPLNVYGYSKFLFDEYVRQILPEVDSQIVGFRYFNVYGPREGHKG
SMASVAFHLNTQLNNGESPKLFEGSDSFKRDFVYVGDVAAVNLWFWENGASGIFNLGTGR
AESFQAVADATLAYHQKGSIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGV
TEYMAWLNRDSDTNSQNHSGS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcagggtttatcggcagcaatatcgtcaaggccctgaat
gacaaaggcattaccgacattttggtcgtagataatctgaaagatggcaccaagtttgtg
aacctggttgacctgaacatcgcggattacatggataaagaagacttcctgatccaggtt
atggcgggcgaagagttcggcgacgaaattgaagcggtattccatgaaggcgcctgctcc
tctaccacggagtgggacggcaagtacatgatggacaacaactatcagtactccaaagag
ctgcttcactactgcctggagcgcgagatcccgttcctgtacgcctcttccgcagccacc
tacggcggccgtaccagcaactttatcgaatcccgcgaatacgagcagccgctcaacgtc
tacggctactccaagttcctgtttgacgaatacgtacgccagatcctgccggaagttgac
tcgcagatcgtcggcttccgctatttcaacgtctacgggccgcgcgaaggccataaaggc
agcatggcaagcgtggcgttccacctcaatacccagctgaataatggcgaaagtccgaaa
ctgttcgaaggcagcgatagcttcaagcgcgacttcgtctacgtcggcgacgtggcggcg
gtcaacctgtggttctgggaaaacggcgcgtccggtattttcaatctcggcaccggccgg
gcagagtccttccaggcggtagccgatgccaccctggcgtaccaccagaagggcagcatc
gaatacattccgttcccggacaagctgaagggccgctaccaggcatttacccaggcagac
ctcactaacctgcgcgcggcgggttatgacaaaccgttcaagaccgtcgccgaaggcgta
acggaatatatggcctggctcaaccgcgacagcgatacaaattcacaaaatcattcgggc
agctaa
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