Raoultella ornithinolytica S12: TE10_08330
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Entry
TE10_08330 CDS
T03629
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
ron
Raoultella ornithinolytica S12
Pathway
ron00310
Lysine degradation
ron01100
Metabolic pathways
ron01110
Biosynthesis of secondary metabolites
ron01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ron00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
TE10_08330
Enzymes [BR:
ron01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
TE10_08330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DUF6348
Motif
Other DBs
NCBI-ProteinID:
AJF72071
LinkDB
All DBs
Position
1794271..1796418
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AA seq
715 aa
AA seq
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MNVIAIMNHMGVYFKEEPIRELHRALERLDFRIVYPNDREDLLKLIENNSRLCGVIFDWD
KYNLELCEEISKLNEYMPLYAFANTYSTLDVSLNDLRMQVRFFEYALGAADDIADKIKQN
TDEYIDTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGPNTMKSDI
SISVSELGSLLDHSGPHKEAEEYIARVFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLI
DRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVH
AVITNSTYDGLLYNTDFIKKTLDVKSIHFDSAWVPYTNFSPIYAGKCGMSGGRVEGKIIY
ETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNA
GKRLIDGSIERSIKFRKEIKRLKGESEGWFFDVWQPEHIDGAECWPLRSDSAWHGFKNID
NEHMYLDPIKVTLLTPGMKKDGTMDEFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIG
IDKTKALSLLRALTDFKRAFDLNLRVKNMLPSLYREDPEFYENMRVQELAQNIHKLVEHH
NLPDLMFRAFEVLPKMMVTPYAAFQKELHGQTEEVYLEEMVGRVNANMILPYPPGVPLVM
PGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKDENTK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttatcgcaatcatgaatcacatgggcgtctactttaaagaagagcctatccgt
gaactgcatcgtgcccttgaacgcctggacttccgtattgtctatccgaacgaccgcgaa
gatttactgaaacttatcgaaaataactcccgcctgtgcggcgttatctttgactgggat
aaatacaatcttgagctgtgcgaagagatcagcaagctgaacgaatatatgccgctgtac
gctttcgccaacacctactccacgctggacgtcagtctcaacgatctgcggatgcaggtt
cgcttcttcgaatatgcgctgggcgcggctgacgacatcgccgataaaatcaaacagaac
accgatgaatatatcgatacgattctgccgccgctgaccaaggcgctgttcaaatacgtg
cgtgaaggcaaatacaccttctgtaccccaggccacatgggcggtaccgccttccagaaa
agcccggtaggcagcatcttctacgatttctttggccctaacaccatgaagtcggatatc
tcgatttcggtttctgaactgggctccctgctggatcacagcggcccgcacaaagaagcg
gaagagtatatcgcccgcgtctttaacgctgaacgcagctacatggtgaccaacggcacc
tctaccgccaacaaaatcgtcggtatgtactcggccccggccggcagcaccgtgctgatt
gaccgtaactgccacaaatcgctgacccatctgatgatgatgagcgacattacgccaatc
tacttccgcccgacccgtaacgcctacggtatcctcggcggcatcccgcagagcgaattc
cagcacgcgaccatcgcgaagcgcgttaaagagaccccgaacgcgacctggccggtgcac
gcggttatcaccaactccacctacgatggcctgctgtacaacaccgatttcatcaagaaa
accctcgatgttaaatccatccactttgactcagcgtgggtgccttacaccaacttctcg
ccaatctatgccggtaaatgcgggatgagcggcggccgcgtggaagggaaaatcatttac
gaaacccagtccacccacaagctgctggcggcgttctcccaggcttcaatgatccacgtg
aaaggtgacatcaacgaagaaacctttaacgaagcctacatgatgcacaccaccacctct
ccgcactacgggatcgtggcctccaccgaaaccgccgcggcgatgatgaaaggcaacgcc
ggtaagcgtctgatcgacggctctattgaacgttcaatcaagttccgtaaagagatcaag
cgtctgaaaggcgagtccgaaggctggttcttcgacgtatggcagccggagcatatcgac
ggtgcagaatgctggccgttgcgttccgacagcgcatggcacggtttcaaaaacatcgat
aacgagcacatgtacctcgacccgattaaggtcactctgctgactccggggatgaaaaaa
gacggcaccatggatgagttcggtattccggccagcatcgtggcgaaatacctcgacgaa
cacggcatcgtggtcgagaaaaccggcccgtacaacctgctgttcctgttcagcattggt
atcgacaaaaccaaggccctgagcctgctgcgcgcgctaaccgacttcaaacgcgcgttc
gacctcaacctgcgtgtgaaaaacatgctgccgtctctgtaccgcgaagatcctgaattc
tatgaaaacatgcgcgttcaggagctggcacagaacattcacaaactggtcgagcatcac
aacctgccggacctgatgttccgcgcgttcgaagtgctgccaaaaatgatggtgacgccg
tacgctgcgttccagaaagagctgcacggtcagaccgaagaggtctatctcgaagagatg
gttggtcgtgtcaatgccaacatgatcctgccgtatcctccgggagttccgctggtcatg
ccgggtgagatgatcaccgaagagagccgtccggtgctggagttcctgcagatgctgtgc
gaaatcggcgcccactacccgggcttcgaaaccgatatccacggcgcatatcgtcaggcg
gatggtcgctacaccgttaaggtgctgaaagacgaaaacaccaagtaa
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