Roseimicrobium sp. ORNL1: G5S37_11385
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Entry
G5S37_11385 CDS
T06460
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
roo
Roseimicrobium sp. ORNL1
Pathway
roo00540
Lipopolysaccharide biosynthesis
roo01100
Metabolic pathways
roo01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
roo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
G5S37_11385 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
roo01005
]
G5S37_11385 (rfaD)
Enzymes [BR:
roo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
G5S37_11385 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
roo01005
]
Core region
G5S37_11385 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
QIF02110
UniProt:
A0A6G6K3V7
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Position
complement(2805814..2806818)
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AA seq
334 aa
AA seq
DB search
MAFSSSSSPRILVTGGAGFIGSALVWALNLRGNENIVVTDRLGTDEKWKNLVALKYADYL
DADDLLKLVETRPDHLGKFDVVYHLGANSATTERDAHHLMKNNFEYTKTLAHWALGMGAR
FVYASSAATYGDGAFGMDDKMEDIDVLRPLNMYGYSKHLFDQYARRAGIADRIVGLKYFN
VYGPNENHKADMRSVVNKAFAQICNEGKVQLFRSHRPDYGDGEQMRDFLYVKDAVDMTIF
LGNNADAGGLYNLGSGKARSWKQLVSAIFAAMDLPVNIEFVDMPAHLQAKYQYYTCADVS
KLRSAGFNGTITELEVAVKDYVQGYLAPGKLLGD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcattctccagcagcagttctcctcgcatcctcgtcaccggcggcgccgggttcatt
ggttcggcgcttgtgtgggcgctcaatctgcggggaaatgagaacatcgtcgtgaccgac
cgcctcggtacggatgagaagtggaagaacctcgtcgcgctgaagtatgcggactacctg
gatgcggatgacctgctgaagcttgtcgaaacgcggcccgatcacctgggcaagttcgat
gtggtgtatcacctcggtgcgaactcggcgacgacggagcgggatgcacaccacctgatg
aagaacaacttcgagtacacgaagaccctggcgcactgggctctgggcatgggcgcccgc
tttgtgtatgcctcctccgccgcgacgtatggtgatggcgcctttggcatggatgacaag
atggaggacatcgacgtgctccgcccgctgaacatgtacggctactcgaagcacctcttc
gaccagtatgcccgccgcgccggcatcgcggaccgcatcgtggggctgaagtacttcaac
gtgtatggcccgaatgagaaccacaaggccgacatgcgctccgtggtgaacaaggccttc
gcccagatctgcaacgaaggaaaggtgcagctcttccgcagccaccgcccggactacggc
gatggcgaacagatgcgagacttcctgtatgtgaaggacgcggtggacatgaccatcttc
ctcggcaacaacgcggacgcaggcggcctttacaacctcggctccggcaaggcccgctcg
tggaagcagctcgtgagcgccatcttcgccgccatggacctgccggtgaacatcgagttc
gtggatatgccggcgcatctccaggcgaagtaccagtactacacctgtgcagacgtctcc
aagctgcgctcggccggcttcaacggcaccatcaccgagctcgaagttgccgtgaaggac
tatgtgcagggttatctggcgcccgggaagctgctcggggactga
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