Roseimicrobium sp. ORNL1: G5S37_23045
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Entry
G5S37_23045 CDS
T06460
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
roo
Roseimicrobium sp. ORNL1
Brite
KEGG Orthology (KO) [BR:
roo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
roo03009
]
G5S37_23045 (rimO)
Enzymes [BR:
roo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
G5S37_23045 (rimO)
Ribosome biogenesis [BR:
roo03009
]
Prokaryotic type
ribosomal protein modification factors
G5S37_23045 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QIF04276
UniProt:
A0A6G6KA00
LinkDB
All DBs
Position
complement(5726145..5727518)
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AA seq
457 aa
AA seq
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MIKVGLVSLGCAKNLIDSEIMIGHLQQAGMAMTPEPDLADVLIINTCSFIDMAKKESIAS
VHEAVDGRADGGKKRAKQKIIVAGCMAQRFSQELPNLMPEVDAFIGLDQLTKVAPVIEGL
MGKKRTEDEAPENHVTEKPQWIPDYDTPRFRLTPKHSAYVKIAEGCNHPCSFCIIPKIRG
RHRSRTQESVVKEVQALVKSGVKEINLISQDTTYFGMDKWEGQRPNPRSGVDSTRGESLA
TLIRELNTIEGDFWIRLLYTHPAHWSDELIKAVAESPKVARYIDIPLQHISDNMLTLMKR
ETDGNYIRDLVKRMRAGIPGLAIRTTFIVGFPGETEADFEELVQFIDESKFERAGVFNYS
KEEGTRAYKMEGHIHHSTRQRRWNEAMRALQHRAEEFNASMVGKTVRVLVEKPGEGRTYM
DAPDIDGTVFVDADLPVGEFADVTIQDWRGYDLVAKR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagtcggactcgtctcccttggctgtgccaagaacctcattgattcggaaatc
atgattggccacctccagcaggcgggcatggccatgactccggagcccgatcttgccgat
gtgctcatcatcaatacctgctccttcatcgacatggcgaagaaggagagcatcgccagc
gtgcacgaggccgtggatggccgtgcggacgggggcaagaagcgcgcgaagcagaagatc
atcgtggccggttgcatggcccagcgcttctcccaagagctgccgaacctcatgcctgag
gtggatgccttcatcggcctggaccagctcacgaaggtggccccggtcatcgagggtctc
atgggcaagaagcgcacggaggacgaggcgcctgagaaccatgtgacggaaaagccgcag
tggattccggattacgacacgccccgcttccgcctcacgccgaagcactccgcgtatgtg
aagattgccgagggctgcaatcacccgtgcagcttctgcatcatcccgaaaatccgtggc
cgccaccgcagccgcacgcaggagagcgtggtgaaggaagtgcaggccctggtgaaaagc
ggggtgaaggaaatcaacctcatctcccaggacacgacctacttcggcatggacaagtgg
gagggccagcgcccaaacccccgcagcggcgtggacagcacccgtggcgagagccttgcc
acactcatccgtgagctgaacaccatcgaaggtgacttctggattcgcctgctctacacg
caccccgcgcactggagtgatgaactcatcaaggccgtggccgaaagcccgaaggtggca
cgttacatcgacatcccgctgcagcacatcagcgacaacatgctgacgctcatgaagcgc
gagacggatggaaactacatccgtgacctcgtgaagcgcatgcgtgcgggcattcccgga
ctggcgattcgcaccaccttcatcgtcggtttccccggcgagacggaggcggatttcgaa
gagctcgtccagttcatcgacgaatccaagttcgagcgcgccggcgtcttcaattactcc
aaggaggaaggcacccgtgcctacaagatggaagggcacatccaccacagcacgcgtcag
cgtcgctggaatgaagcgatgcgcgccctgcagcatcgtgcggaagagttcaacgccagc
atggtgggcaagaccgtccgcgtgctcgtggagaagcccggcgagggccgcacttacatg
gatgctccggatattgacggcaccgtgttcgtggatgcggacctgcctgtgggcgagttc
gcggatgtcaccattcaggactggcgtggatacgacctggtggcgaagcggtag
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