Raoultella ornithinolytica B6: RORB6_06490
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Entry
RORB6_06490 CDS
T02625
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror00220
Arginine biosynthesis
ror00791
Atrazine degradation
ror01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
RORB6_06490
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
RORB6_06490
Enzymes [BR:
ror01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
RORB6_06490
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
HlyD_3
Biotin_lipoyl_2
ATP-grasp
HlyD_D23
ATP-grasp_5
ATP-grasp_3
DUF5558
RimK
Motif
Other DBs
NCBI-ProteinID:
AGJ85991
LinkDB
All DBs
Position
complement(1449546..1453151)
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AA seq
1201 aa
AA seq
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MFKTLLIANRGAIACRILRTLRAMQVKGVAVYSDADLSSLHIREADEAIGLGDGPAAQTY
LMTEKIIAAAVKSGAEAIHPGYGFLSENAAFAEACEAAGLAFVGPTPAQLRTFGLKHTAR
ALAKAQGVPLLEGTGLLADSVEACRAADAIGYPVMLKSTAGGGGIGMRVCRDARELTDAF
ETVQRLGQNNFSDAGVFLEKYIERARHLEVQIFGDGQGEVIALGVRDCSIQRRNQKVIEE
TPAPNLPTATAEALCAAAVALGKAVSYRSAGTVEFVYDSAAQRFYFLEVNTRLQVEHGVT
EQVWGVDLVRWMVALAAGDLPPLTALLADLTPRGHAIQARIYAEDPGRQFQPSPGLLTEV
LFPPADGETLRIDRWVEAGCDVPPFFDPMLAKTIAWRPTRAEAIAELARALANTRLYGVE
TNRIYLQQILGFEPFTQGEPWTRCLEQLNYRAATVEVLSAGTQTSVQDFPGRLGYWAVGV
PPSGPMDDRALRLGNRLLDNPPGAAALEITLNGPTLKFHCAALAVVSGAGVPVTLDGIAQ
EMNRVLPIPAGATLKIGAVEGAGVRSYLCLRGGIQVPDYLGSKSTFTLGQFGGHGGRALR
SGDVLHLAPDGKGETGAALPVALVPPLATVRTLRVIYGPHGAPEFFAADYIDTFFATDWE
VHFNSSRTGVRLIGPKPLWARDSGGDAGLHPSNIHDNPYAVGAVDFTGDMPVILGPDGPS
LGGFVCPVTVIEADLWQLGQLKAGDKVRFVAVDLSTARRLAAGYREELATLEAMPVAWQP
ARLTSPVVMSCGEADKRLVARLSGDTHLLLEAGEAELDLVLRFRIHALMQALESGSRAGV
IDLTPGIRSLQIHFQPETLTLDALLSWVSVAWAAVCVSDDLQVPTRVVHLPLSWDDPACR
TAIDKYMTTVRRDAPWCPSNLEFIRRINDLPDEQAVWQTVFDASYLVMGLGDVYLGAPVA
TPLDPRHRLVTTKYNPARTWTAENSVGIGGAYLCVYGMEGPGGYQFVGRTLQMWNRYHEV
ADFAGKPWLLRVFDQLRFYPVSAEELQQIRRDFPLGRYPLRIEHSTLRLAEYQQFLQQEA
VSIDAFRQHQQRAFNDERERWIASGQAHFDSQEVPADAGVEAPLQRGQQGVESPISGNLW
QVQAAAGSHVRAGDVLVVLESMKMEIPLLAPCDGVVQQMNVQPGASVRAGQRVAVILEEN
V
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaccttactgattgctaaccgcggcgccattgcctgtcgaattttacgcacc
ctgcgcgccatgcaggtgaagggcgtagcggtctattccgacgcggatctcagcagcctg
catatccgtgaagccgatgaggcgatcggccttggcgacggcccggcggcgcaaacctac
ctgatgacggaaaaaatcatcgccgccgctgtaaaaagcggggccgaagcgattcatccc
ggctacggtttcctgtcggaaaacgccgccttcgccgaggcatgtgaagctgccgggctg
gcgtttgttggcccgacgcccgctcagctccgcacgtttggcctgaaacacaccgctcgg
gcgctggccaaagcgcagggcgtgccgctgctggaggggaccggtctgctggccgatagc
gttgaagcgtgccgggcggcggacgccatcggttatccggtgatgttaaaaagcaccgcc
gggggcggcggtatcgggatgcgcgtctgtcgcgacgcccgcgagctgacggacgctttt
gagaccgtacagcggctggggcagaacaactttagcgatgcgggcgtgtttctcgaaaaa
tacattgaacgcgcgcgccatctggaagtgcagatattcggcgacgggcagggcgaggtc
atcgccctcggggtgcgcgactgctcgatacagcggcgcaatcaaaaagtgatcgaagag
actccggcgcccaatttacccaccgcaacggcggaggccctctgtgcggcggcggtcgcg
ctgggcaaagcggtcagctatcgcagcgccgggacggtcgaatttgtctatgacagcgcg
gcgcagcgcttctattttctcgaggtgaatacccggctccaggtggaacatggcgtcacc
gagcaggtgtggggcgtcgacctggtgcgctggatggtggcgctggcggccggagattta
ccgccgctcactgcgctgctggccgatctgactcctcgggggcacgctatccaggcgcgt
atttatgcggaggatccgggccggcagtttcagccatcgccgggtctgctgaccgaggtg
ctctttccaccggcggacggcgaaacgcttcgcatcgaccgttgggtagaagccggctgc
gacgtgccgccattttttgatccgatgctggccaaaacgatcgcctggcggccaacccgc
gcagaggctatcgctgaactggcccgggcgctggcgaacacccgcctgtatggcgtggaa
actaaccgcatctatctccagcagattctgggctttgaaccctttacccagggtgaaccc
tggacccgttgcctggaacagctgaactatcgggccgccaccgtcgaggtgctcagcgcc
gggacgcagaccagcgtccaggattttcccggacggctgggctactgggcggtgggcgtc
ccgccgtcggggccgatggacgatcgggcgctgcgtctcggcaaccggctgctggataac
ccgccgggagcagcggcgctggaaatcaccctgaacgggccaacgctgaagtttcattgc
gcagccctggcggtggtgagcggcgccggcgtcccggtcacccttgacggtatcgcgcaa
gagatgaaccgcgtattgccgatcccggccggggcgacgctgaaaatcggcgccgtcgaa
ggggcgggggtcagaagctacctctgcctgcgcggcggcatccaggtgccggattatctg
ggcagcaaaagtacctttactcttggacagtttggcggccatggcgggcgggcgctgcgc
agcggggatgttctgcatctggcgccagacggcaagggagaaactggcgccgcgctgcct
gttgcgctggtgccgccgctggcaacggtgcgtaccctgcgggtgatttacggtccgcac
ggtgcgccggaattttttgccgcagattacatcgacaccttttttgccaccgactgggag
gtgcattttaactccagccgtaccggcgtgcggctgattggccctaaaccgctgtgggcc
cgcgacagcggcggcgacgcggggctgcatccgtcgaatattcacgataacccttatgcc
gtcggcgcggttgattttaccggcgatatgccggttattcttggccccgacggcccgagc
ctcggcggtttcgtctgcccggtgacggtgattgaagccgatctctggcagctggggcag
ttgaaagccggcgacaaggtgcgttttgtcgccgtggatctgtccacggcccgtcgactg
gcggctggctaccgggaggagctggcgacgctggaggcaatgcccgtggcgtggcaaccc
gcgcggttaacttcccccgtggtgatgagctgcggagaggcggataagcgtctggtggcc
cgtctttccggcgatacccatctgctgctggaagcgggagaggcggagctcgatctggtg
ctgcgctttcgcattcatgctctgatgcaggcgctggaaagcggctcccgcgcgggggtg
attgacctgacgccaggtattcgctctctgcaaattcatttccagccggaaaccctgacg
cttgacgcgctgttgagctgggtgagcgtggcgtgggcggcggtgtgcgtcagcgacgat
ctgcaggtgccgacccgggtggtccatctgccgctgtcgtgggacgacccggcctgtcgc
accgctatcgataaatatatgacgaccgtacggcgcgacgcgccatggtgcccgagcaac
ctcgaatttatccgccggattaacgacttaccggacgaacaggcggtatggcagacggtg
ttcgacgccagctatctggtgatggggctgggcgatgtctatcttggcgcgccggtggcg
acgccgctcgatccgcgtcatcgtctggtgaccaccaagtacaacccggcgcgtacctgg
acggcggaaaactcggtggggatcggcggggcctatctgtgcgtctacggtatggaagga
cccgggggctaccagtttgttggccgaacgctgcagatgtggaatcgctatcacgaggtc
gccgacttcgccggtaaaccctggctgctgcgcgtcttcgaccagctgcgtttctacccg
gtttctgccgaggaactgcaacagatccgccgcgattttccgcttggccgctatccgctg
cgcattgagcacagcactctgcggctggcggagtaccagcagtttctgcagcaggaagcg
gtaagtatcgacgcttttcgccagcatcaacagcgcgccttcaatgatgaacgcgaacgc
tggatagccagcggccaggcgcatttcgatagccaggaagtcccggctgacgcgggtgtc
gaggcgccgctgcagcgcggacagcagggcgtggagagcccgatctccggcaatctgtgg
caggtgcaggccgccgcggggagtcatgtgcgcgccggcgacgttctggtggtgctggag
tcaatgaaaatggagatcccgctgttggcgccgtgcgacggcgtggtgcaacagatgaat
gttcagccgggggcgtcggtacgcgccgggcaacgtgtggcggtgatcctggaggagaac
gtatga
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