Raoultella ornithinolytica B6: RORB6_17680
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Entry
RORB6_17680 CDS
T02625
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror00071
Fatty acid degradation
ror00280
Valine, leucine and isoleucine degradation
ror00310
Lysine degradation
ror00362
Benzoate degradation
ror00380
Tryptophan metabolism
ror00410
beta-Alanine metabolism
ror00640
Propanoate metabolism
ror00650
Butanoate metabolism
ror00907
Pinene, camphor and geraniol degradation
ror00930
Caprolactam degradation
ror01100
Metabolic pathways
ror01110
Biosynthesis of secondary metabolites
ror01120
Microbial metabolism in diverse environments
ror01200
Carbon metabolism
ror01212
Fatty acid metabolism
Module
ror_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RORB6_17680 (fadB)
00650 Butanoate metabolism
RORB6_17680 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
RORB6_17680 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RORB6_17680 (fadB)
00310 Lysine degradation
RORB6_17680 (fadB)
00380 Tryptophan metabolism
RORB6_17680 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RORB6_17680 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RORB6_17680 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RORB6_17680 (fadB)
00930 Caprolactam degradation
RORB6_17680 (fadB)
Enzymes [BR:
ror01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RORB6_17680 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RORB6_17680 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RORB6_17680 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
RORB6_17680 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AGJ88216
LinkDB
All DBs
Position
3896861..3899050
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDNLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEALDVLEKQHDLKGLLLRSG
KAAFIVGADITEFLSLFLVPQEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRLLGADSALEIIAAGKDVSADQALK
IGLVDGIVKPEKLRDGALAILRQAINGDLDWKAKRQPKLEPLKLSKIEAAMSFTIAKGMV
AQTAGKHYPAPITAVKTIEAAARFGREEALNLENQSFVPLAHTKEARALVGIFLNDQYVK
AKAKKLTKNVETPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDINDKSLTLGMNEAAKLL
NKQLERGKIDGLKLAGVIGTIHPTLDYAGFERVDVVVEAVVENPKVKKAVLAETEEKVRP
DTVLASNTSTIPIGELASVLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDDTIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKLFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDASRFGQKNGLGFWRYKEDSKGKP
KKEEDPAVDALLAEVSQPKHDFSDDEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPA
RPAGVLKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctacaaaggcgacaacctgtacctcgactggctggaagatggcattgccgaactg
gtgttcgatgctcccggctcggtgaacaagctcgataccgcaaccgtagccagcctcggt
gaggcgctggacgtactcgaaaaacaacacgatcttaaggggctgttgctgcgctccggg
aaagcggccttcattgtcggcgctgacatcaccgaatttctgtccctgttcctggtacca
caggagcagttgagccagtggctccattttgccaacagcgtctttaaccgcctggaagat
ttaccggtaccgactatttctgcggtgaacggctatgcgctgggcggcggctgcgagtgc
gtgctggcgacggactaccgtctggctacgccggatctgcgtatcggcctgccggaaacc
aaactaggtatcatgccgggctttggcggctcagtacgaatgccgcgtctgctcggcgcc
gatagcgcgctggaaattattgccgccgggaaagatgtcagtgccgatcaggcgctgaaa
atcggcctcgtcgacggtatcgttaaaccagagaaactgcgcgatggcgcactcgccatt
ctgcgtcaggccattaacggcgacctggactggaaagcgaagcgccagccgaagctggag
ccattgaagctcagtaaaattgaagcggccatgagcttcactatcgccaaaggcatggtg
gcgcagaccgccgggaaacactatccggcgccgataacagcggtaaaaaccatcgaagcg
gccgctcgtttcggccgcgaagaggcgctgaatctggaaaaccaaagttttgtcccgctg
gcgcacaccaaagaggcccgcgcgctggtcggtatcttccttaacgatcagtatgtcaaa
gccaaagcgaagaagctgaccaaaaacgttgagacgccgaaacaggccgccgtgctgggg
gccgggatcatgggtggcggtatcgcgtatcagtccgcctggaaaggcgtgccggtgatc
atgaaggacattaacgacaaatcgctgacgctcggcatgaacgaagccgctaagctgctc
aacaagcagcttgagcgcggcaaaatcgatgggctgaagctggccggcgttattggcacg
attcacccgaccctcgattatgctggttttgagcgcgtagatgtcgtggtcgaagccgtc
gtcgagaatccgaaagtgaaaaaggccgtgctggcggaaaccgaagagaaagtccgcccg
gatacggttctggcttctaacacttcaacgattccaatcggtgagctggccagcgtcctg
aaacgtccggaaaacttctgcggtatgcacttctttaacccggtgcatcgcatgccgctg
gtagaagtgattcgcggggaaaaaacctcagatgacaccatcgcaaaagtcgtggcctgg
gcgagcaaaatgggcaaaacgccgatcgtggttaacgattgccccggcttcttcgtcaac
cgcgtgctgttcccctactttgcgggattcagccaactgcttcgcgacggcgcggacttc
cgcaaagtcgataaggtgatggagaaactgttcggctggccaatgggcccggcatacctg
ctcgacgtggtcggcatcgacaccgcacaccacgcgcaggcggtgatggccgccggcttc
ccgcagcgcatgcagaaagattatcgcgacgcgatcgacgcgctgttcgacgccagccgt
ttcggccagaaaaacggtctcggcttctggcggtataaagaagacagtaaaggcaaaccg
aagaaagaagaagacccggccgtcgacgccctgctggcggaagtcagtcagccaaaacat
gacttcagcgacgatgagattatcgcccggatgatgattccgatggtcaacgaagtggtc
cgctgcctggaggaaggcattatcgccagcccggcggaagcggatatggcgctggtttat
ggtctcggcttccctccgttccacggcggcgcattccgctggctggataccctgggcagc
gcaaaatatctcgatatggcgcagcagtaccagcacctcggtccgctgtatgaagtgccg
gaaggactgcgtaataaagcacgccataacgaaccctattatcccccggtagaaccagcc
cgcccggcgggcgttctgaaaacggcttaa
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