Roseivivax sp. THAF197b: FIV09_15825
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Entry
FIV09_15825 CDS
T06253
Symbol
dapE3
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rot
Roseivivax sp. THAF197b
Pathway
rot00300
Lysine biosynthesis
rot01100
Metabolic pathways
rot01120
Microbial metabolism in diverse environments
rot01230
Biosynthesis of amino acids
Module
rot_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rot00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FIV09_15825 (dapE3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rot01002
]
FIV09_15825 (dapE3)
Enzymes [BR:
rot01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
FIV09_15825 (dapE3)
Peptidases and inhibitors [BR:
rot01002
]
Metallo peptidases
Family M20
FIV09_15825 (dapE3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QFS84305
UniProt:
A0A5P8Z3X5
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Position
3263011..3264288
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AA seq
425 aa
AA seq
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MSDPLFHRIEAKRDDIVALTQALIRIPSLNPPGQFYRECCDLVAERLRPRGFETKLIRAE
GAPGDTERFPRWNLVARREGPRAGECVHFNSHIDVVEVGQGWTRDPFGGALEDDRIYGRG
ACDMKGGLAASIIAAEAFLEENPDYAGAIEISATADEESGGYGGVAYLAQQGYFDPARVQ
HVIIPEPLGKDRICLGHRGGWWAEIETHGEIAHGSMPFLGDCAIRHMGAVLDAFERDLFP
AMAARHTEMPVIPDGARQSTMNINAIHGGQPEEEEGSTALPAHCVPDSCRITVDRRFLIE
EGIEAVEAEMRGLLDGLKETRENFDYSLREINRVLPSMTDEDAPVVTTIRSAIADALGSD
AAFVASPGSYDQKHIDRIGTLKNCIAYGPGVLELAHKPDEWIGVTDMLDSARVMGRALER
LLLPK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcccctgtttcaccgcatcgaggccaagcgtgacgatatcgtcgcgctgacc
caggcccttatccgtatccccagcctcaacccgccgggccagttctaccgcgaatgctgc
gatctggtggccgagcgcctgcgcccgcgcggcttcgagacgaagctgatccgcgcggaa
ggcgcgccgggcgatacggagcggtttccgcgctggaacctggtggcccgccgcgaaggg
ccgcgcgcgggcgagtgcgtgcatttcaacagccatatcgacgtggtggaggtcggccag
ggctggacgcgcgacccgttcggcggcgcgctcgaagacgaccggatctatggccggggg
gcctgcgacatgaagggggggctcgccgcgtcgatcatcgcggccgaggcgttcctggag
gaaaatcccgattacgcgggcgccattgaaatctcggccacggcggacgaggaatcgggc
ggctatggcggcgtcgcctacctggcccaacagggatatttcgacccggcccgcgtgcag
catgtcatcattcccgaacccctgggcaaggaccggatctgtctgggccacagaggcggc
tggtgggccgagatcgagacccatggcgagatcgcccatgggtcgatgccgttcctgggc
gattgcgcgatccggcatatgggtgcggtgctcgatgccttcgagcgcgatctctttccg
gccatggccgcccggcacacggagatgccggtcattcccgatggggcgcggcaatcgacg
atgaacatcaacgcgatccatggcggacaacccgaggaagaggaaggcagcaccgccctg
cccgcccattgcgtgcccgacagctgccgcatcaccgtggaccgccgcttcctgatcgag
gaaggcatcgaggcggtggaggcggagatgcgcgggcttctcgacgggctgaaggagacg
cgcgagaacttcgactattcgctgcgcgagatcaaccgcgtcctgccctcgatgaccgat
gaggatgcccccgtcgtcaccacgatccgcagcgctatcgccgatgcgcttggatcagac
gccgccttcgtggcctcgcccggaagttacgatcagaagcatatcgaccggatcggcacc
ctgaagaactgcatcgcctatgggccgggggtgctggagctggcgcataagcccgatgaa
tggatcggggtgacggatatgctggattcggcgcgggtgatgggccgcgcgctggagcgg
ctgctgctgcccaaatga
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