Rahnella sikkimica: BV494_11940
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Entry
BV494_11940 CDS
T05331
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
rox
Rahnella sikkimica
Pathway
rox00730
Thiamine metabolism
rox01100
Metabolic pathways
rox01240
Biosynthesis of cofactors
rox04122
Sulfur relay system
Module
rox_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BV494_11940
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BV494_11940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rox03016
]
BV494_11940
Enzymes [BR:
rox01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
BV494_11940
Transfer RNA biogenesis [BR:
rox03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
BV494_11940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AVF35595
UniProt:
A0A2L1URM5
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All DBs
Position
complement(2586874..2588322)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILSSSIRNIVRPHDETLAVVRHWDHIEVRSKDESKH
DLIQELLCRIPGIRYVEEVEDRPYTDVHHIFEQVLEAYRHEVEGKTFCVRVKRRGKHDFS
STEVERYVGGGLNQHIESAKVSLTAPQVTVKLEINDDKLVLVKSRLEGQGGYPIGTQEDV
MSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQVAHYLWNRFGSSHRVRFI
SIDFEPVVGEILEKVEDGQMGVVLKRMMVRAASSIAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISHDKEHIIKIAREIGTEDFAKTMPEYCGVISKSPTVKAVKAKI
EAEEAMFDFSVLDKVVSEARNVDIREIAAQAAEVVPEVETVAEFTSTDIVLDVRAPDEVE
AQPLALENVEVKPLAFYKLATQFGDLDQTKTYLLYCDRGVMSRLQALYLKEQGFNNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttccccgaaatcaccatcaagagccaatctgtgcgtttg
cgcttcattaagatcctctcaagcagcattcgcaacattgtgcggccgcatgatgagacg
ctggcagtagtccgccattgggatcatatcgaagttcgcagcaaagacgaaagcaaacac
gacctgattcaggaattactttgccgtattccgggcatccgttatgtcgaagaagtagag
gatcgtccttatactgacgttcaccacattttcgaacaggttctcgaagcctatcgccat
gaagttgaaggtaaaacgttttgcgttcgtgttaaacgtcgtggcaaacatgatttttcg
tctacggaagttgagcgctacgttggcggcggtctgaaccagcacatcgaatcggcgaag
gtcagcctgaccgcgccacaggtgacggtgaaactggaaatcaatgacgacaagctggtg
ctggtgaaaagccgtctcgaaggtcagggcggttatccgatcgggactcaggaagatgtt
atgtcgctgatttctggcggtttcgactccggtgtctccagttatatgctgatgcgtcgc
ggctgtcgtgtgcattattgcttcttcaatctgggcggcgcagcgcatgaaattggcgtg
aaacaggtcgcacattatctgtggaaccgatttggcagctcgcaccgcgtgcgtttcatc
tctatcgatttcgaaccggttgtgggcgagatcctcgagaaagtggaagacggccagatg
ggcgttgtgctcaaacgtatgatggtacgtgccgcttcttctattgctgaacgttatggc
gtgcaggcgctggtcaccggcgaagcactgggccaggtgtccagccagacgctgaccaac
ttacgcctgatcgacaacgtgtctgacacgctgatcctgcgtccgctgatttctcacgat
aaagagcacatcatcaagattgcccgtgaaatcggtacggaagatttcgcgaaaaccatg
ccggaatattgcggtgtgatttccaaaagcccgaccgtgaaagccgtgaaagcgaaaatc
gaagccgaagaagcgatgttcgatttcagcgtgctggataaagtcgtcagcgaagcgcga
aatgtcgatatccgcgaaattgcagcgcaagccgccgaagtcgtgccggaagttgaaacg
gtcgctgaatttacgtcaaccgacattgtgctggatgtccgtgcgccggatgaagttgaa
gcacagccgctggcgctggaaaacgttgaggttaaacctctggcgttctataaactggcg
actcagtttggcgatctcgaccagactaaaacctatctgctgtattgcgaccgtggcgta
atgagccgcttgcaggcgctgtatctgaaagagcagggctttaacaacgtcaaagtttac
agaccttaa
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