Rhodopseudomonas palustris CGA009: TX73_013865
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Entry
TX73_013865 CDS
T00153
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rpa
Rhodopseudomonas palustris CGA009
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpa03009
]
TX73_013865 (rimO)
Enzymes [BR:
rpa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
TX73_013865 (rimO)
Ribosome biogenesis [BR:
rpa03009
]
Prokaryotic type
ribosomal protein modification factors
TX73_013865 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WCL92841
LinkDB
All DBs
Position
complement(3048670..3049995)
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AA seq
441 aa
AA seq
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MQQATAPKISFVSLGCPKALVDSERIITRLRAEGYELARKHDGADLVIVNTCGFLDSAKQ
ESLAAIGEAMATNGKVIVTGCMGAEPEQIEAAYPGVLSITGPQQYESVLEAVHRARPALH
NPHLDLVPPQGVRLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPAGDVLREAEKLV
AAGVKELLVISQDTSAYGVDVKYAESPWKDRAVRAKFLDLASELGELGAWVRLHYVYPYP
HVDEVIGLMADGKVLPYLDIPFQHASPDVLKLMKRPAAQDKTLDRIKRWREQCPDLALRS
TFIVGFPGETERDFEFLLEWLDEAEIDRLGAFKYEPVAGAPSNALPDQIADEVKQERWNR
LMARQQAISARRLKRKVGTRQQVIIDEIGPTVAKGRSKADAPDIDGAVYLSSRRPLRVGE
IVTAKIDRADAYDLHGTVAGF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggccaccgcgcccaagatcagttttgtttcgctgggatgccccaaggccctg
gtcgattccgagcgcatcatcacccggttgcgcgccgagggctacgagctggcgcgcaag
cacgacggcgcggacctcgtcatcgtcaacacctgcggcttcctggacagtgccaagcag
gaatcgctggcggccatcggcgaagcgatggcgaccaacggcaaggtgatcgtcaccggc
tgcatgggcgccgagccggagcagatcgaagccgcctaccccggcgtgctgtcgatcacc
ggcccgcagcaatatgaaagcgtgctcgaggcggtgcatcgcgcccggccggcgctgcac
aacccgcatctcgatctggtccccccgcagggcgtgcggctaacgccgcggcactatgcg
tatttgaagatctcagagggctgcaacaatcgctgcagcttctgcatcatcccgaagctg
cgcggcgatctggtatcacgcccggccggcgacgtgctgcgcgaggccgagaagctggtc
gccgccggagtcaaggagctgctggtgatctcgcaggacacctcggcctacggcgtcgat
gtgaagtacgcagagagcccgtggaaggaccgtgccgtccgcgccaaattcctcgatctg
gccagcgaactcggggagctcggcgcctgggtgcggctgcactacgtctatccgtatccg
catgtcgacgaggtgatcggcttgatggcggacggcaaggtgctgccttatctcgacatc
ccgttccagcacgccagccccgacgtgctgaagctgatgaagcgcccggccgctcaggac
aagacgctcgaccggatcaagcgctggcgcgagcagtgcccggatctggcgctgcgctcg
accttcattgtgggcttccccggcgagaccgagcgcgatttcgaattcctccttgaatgg
ctggacgaagcagaaatcgatcgtctcggcgcgttcaaatacgagccggtcgccggcgca
ccgtccaacgccctgcccgatcagattgcggacgaggtcaagcaggagcgctggaacagg
ctgatggcgcggcagcaggcgatctccgcccgccggctcaagcggaaggtcggcacccgc
cagcaggtgatcatcgacgagattggcccgaccgttgccaaaggccgctccaaggccgac
gcgccggacatcgacggcgcggtctatctgtcgagccgccgcccgctgcgcgtcggcgaa
atcgtcaccgccaagatcgaccgcgccgacgcgtacgacctccacgggaccgtggcgggg
ttctga
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