Rhodopseudomonas palustris CGA009: TX73_024545
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Entry
TX73_024545 CDS
T00153
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa03030
DNA replication
rpa03410
Base excision repair
rpa03420
Nucleotide excision repair
rpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TX73_024545 (polA)
03410 Base excision repair
TX73_024545 (polA)
03420 Nucleotide excision repair
TX73_024545 (polA)
03440 Homologous recombination
TX73_024545 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpa03032
]
TX73_024545 (polA)
03400 DNA repair and recombination proteins [BR:
rpa03400
]
TX73_024545 (polA)
Enzymes [BR:
rpa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TX73_024545 (polA)
DNA replication proteins [BR:
rpa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TX73_024545 (polA)
DNA repair and recombination proteins [BR:
rpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TX73_024545 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TX73_024545 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DprA_N
Motif
Other DBs
NCBI-ProteinID:
WCL94929
UniProt:
Q6N0N9
LinkDB
All DBs
Position
5330467..5333544
Genome browser
AA seq
1025 aa
AA seq
DB search
MPKTTKSAAATPAASSVTPPAPVGVKPPGKGDHIFLVDGSSYIFRAYHALPPLNRKSDGL
QVNAVLGFCNMLWKLLRDMPPENRPTHLAIIFDKSEVTFRNHLYPEYKAHRPPAPEDLIP
QFALIREAVRAFDLPCLEQSGFEADDLIATYVREACEAGATATIVSSDKDLMQLVTDCVV
MYDTMKDRRIGVPEVIEKFGVPPNKVVEVQALAGDSVDNVPGVPGIGIKTAAQLINEYGD
LETLLARAPEIKQPKRREALIENAEKARISRKLVLLDDHVQLEVPLEELAVHEPDARKLV
AFLKAMEFTTLTRRVADYAQIDPSDVEAETALKSAVPPLAKSAAASGDLFAGQEPSPQPS
PASGGGSALASGQGGPLNAGRGRDGRPGVVLSPEALVAARAEAARKIPVDRTAYKTLRSL
DELHGFIARIHDTGIVALETVATSIDPMQAELIGLALALGPNDACYIPLLHKQSGDGDGL
FAAGLAPDQIGPRDALDALKPILESAGVAKVGFAIKFAAVLLAQHGLTLRNIDDPQLMSY
ALDAGRGSHALDALSESNLGHTLHTLTELTGTGKNKIGFDQVPVDRATAYAAERADVSLR
LARVLKPRLVAGSMTAVYETLERPLVGVLARMERRGISIDRQVLSRLSADFAQTAARIEA
EIRELAGEDINIGSPKQLGDILFGKMGLPGGSKTKTGAWSTSAQVLDELAEQGHEFPRKI
LDWRQVSKLRSTYTDALPNYVHPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTEDGR
KIRRAFVATPGNKLVSADYSQIELRLLSEVADVPALRKAFQDGIDIHAMTASEMFGVPVE
GMPSEIRRRAKAINFGIIYGISAFGLANQLSIPREEAGAYIKRYFERFPGIRAYMDETRD
FCRNHGYVTTLFGRKCHYPDIKASNPSIRAFNERAAINARLQGSAADIIRRAMVRMEDAL
AEKKLSAQMLLQVHDELIFEVPEAEVEATLPVVRAVMQDAPFPAVILNVPLQVDARAADN
WDEAH
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaacgaccaagtccgccgctgcgacgcctgccgcttcctccgtcacgccccct
gcccccgtcggcgtcaagccgcccggcaagggcgaccacatcttcctggtcgacggctcg
tcgtacatcttccgcgcctatcacgcgctgccgccgctgaaccgcaagtcggacgggctg
caggtcaatgccgtgctcggcttctgcaacatgctgtggaagctgctccgcgacatgccg
ccggagaaccggccgacgcatctcgccatcatcttcgacaagtcggaagtcaccttccgc
aaccatctctaccccgaatacaaggcgcaccggccgccggcaccggaggatctgatcccg
caatttgccctgatccgcgaggcggtgcgggcgttcgacctgccgtgcctggaacagtcc
ggtttcgaggccgacgatctgatcgccacttacgtgcgcgaggcgtgcgaggccggggcc
acggcgacgatcgtgtcgtccgacaaggacctgatgcagctcgtgaccgactgcgtggtg
atgtacgacaccatgaaggaccgcaggatcggcgtgcccgaggtgatcgagaaattcggc
gtgccgcccaataaggtggtcgaagtccaggcgctcgccggcgacagcgtcgacaacgtg
ccgggcgtgccgggcatcggcatcaagaccgccgcgcagctgatcaacgaatatggcgac
ctcgaaaccctgctggcccgcgcacctgagatcaagcagccgaagcggcgcgaggcgctg
atcgagaacgccgagaaggcgcggatctcgcgcaagctggtgctgctcgacgaccatgtg
caactagaggtcccgctggaagagctcgcagtgcacgagcccgacgcgcgaaaactggtg
gcattcctcaaggcgatggaattcaccacgctgacgcggcgcgtcgccgactatgcgcag
atcgatccgtcggatgtcgaggcggagacggcgctgaagtcggccgttccgccgcttgcg
aagagcgcggccgcaagcggcgacctgtttgcggggcaagagccctcaccccagccctct
cccgcaagcgggggagggagcgcgctggcctcggggcaaggtggtccgctcaatgccggg
cgcgggcgcgacggcaggccgggcgtcgtgctgtcgccggaggcgctggtggcggcgcgg
gccgaggctgcccgcaagattccggtcgaccgcactgcctacaagactttgcgcagcctc
gacgaactgcacggcttcatcgcccgcatccacgacaccggcatcgtcgcgctggagacc
gtcgcgacctcgatcgatccgatgcaggcggagctgatcggccttgccctggcactcggc
ccgaacgatgcctgctacattccgctgctgcataagcagagcggcgacggtgacggcctg
ttcgccgccggcctcgcgcccgaccagatcggcccccgcgacgcgctcgatgcgctgaag
ccgatcctggaatccgccggcgtcgccaaggtcggcttcgcgatcaaattcgccgcggtg
ctgctggcgcagcacggcctgaccttgcgcaacatcgacgatccgcagctgatgtcctac
gcgctcgacgccggccgcggcagccacgcgctcgatgcgctgagcgaaagcaatctcggc
cacaccctgcacacgctcactgagctgaccggcaccggcaaaaacaagatcggcttcgat
caggtgccggtcgaccgtgccaccgcttacgcggccgaacgcgccgacgtgagcttgcgg
ctggcccgcgtgctgaagccgcgcctcgtcgccggcagcatgaccgcggtgtacgagacg
ctggagcgccctcttgtcggcgtgctggcgcggatggaacggcgcggcatctcgatcgac
cgacaggtgctgtcgcggctgtcggcggatttcgcccagactgcggcgcggatcgaggcc
gagatccgcgagctggccggcgaggacatcaatatcggcagtcccaagcagctcggcgac
atcctgttcggcaagatgggcctgccgggcggcagcaagaccaagaccggcgcgtggtcg
acctcagcgcaggtgctcgacgaactcgccgaacagggccacgaatttccgcgcaagatt
ctggactggcgccaggtgtcgaagctgcgctcgacctacaccgacgcgctgccgaattac
gtgcatccgcagacccaccgcgtccacaccacctatgcgctcgccgccaccaccaccggt
cggctgtcgtcgaacgagccgaacctgcagaacatcccggtgcgcaccgaggacggccgc
aagatccgccgcgccttcgtggcgacgcccggcaacaagctggtgtcggcggactattcg
cagattgaactgcggctcttgtccgaagtcgccgacgtgccggcgctgcgcaaggcgttc
caggacggcatcgacattcacgcgatgacagcgtccgagatgttcggcgtgccggtcgag
ggcatgccgtcggaaattcgccgccgggcgaaagcgatcaatttcggcatcatctacggc
atctcggcgttcggcctcgccaaccagctcagcatcccgcgcgaggaagccggcgcctac
atcaagcgctacttcgagcgcttccccggcatccgcgcctatatggacgagacccgcgac
ttctgccgaaaccacggctacgtcaccacgctgttcggccgcaaatgccactacccggac
atcaaggcctcgaacccgtcgatccgcgccttcaacgagcgcgccgcgatcaacgcccgg
ctgcaaggctccgccgccgacatcatccgccgcgccatggtgcggatggaggacgcactc
gccgagaagaagctctcggcgcagatgctgctgcaggtgcacgacgaactgatcttcgaa
gtgccggaggctgaggtcgaggcgacgctgccggtggtccgcgcggtgatgcaggacgcg
ccgttcccggcggtgatcctcaacgtcccgctgcaggtggatgcgcgggccgccgataat
tgggacgaagcgcattag
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