Rhodopseudomonas palustris HaA2: RPB_1060
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Entry
RPB_1060 CDS
T00321
Name
(GenBank) Extradiol ring-cleavage dioxygenase LigAB, LigA subunit
KO
K04100
protocatechuate 4,5-dioxygenase, alpha chain [EC:
1.13.11.8
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb00362
Benzoate degradation
rpb00627
Aminobenzoate degradation
rpb01100
Metabolic pathways
rpb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RPB_1060
00627 Aminobenzoate degradation
RPB_1060
00624 Polycyclic aromatic hydrocarbon degradation
RPB_1060
Enzymes [BR:
rpb01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
RPB_1060
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Gene cluster
GFIT
Motif
Pfam:
LigA
Motif
Other DBs
NCBI-ProteinID:
ABD05770
UniProt:
Q2J190
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All DBs
Position
1215069..1215452
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AA seq
127 aa
AA seq
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MSQALAKQPEAGAYLKRDIFGTPIFGPEAAQKGYALNKMCFSFNSAAARADFVADEAAYC
ARYGLTATQTEAILKRDLLKLLDHGGNAYYLAKFAGILGLNMQDIGALQTGMSVEQFKAK
LLAARDS
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggctttggccaaacagccagaagcaggcgcctatttgaagcgcgacatcttc
ggcacgccgatcttcggcccggaagcggcgcagaagggctacgctctcaacaagatgtgc
ttctccttcaattccgccgccgcccgcgccgacttcgtcgcggacgaggcggcctattgc
gcgcgctacggcctcaccgccacgcagaccgaggcgatcctgaagcgcgatctgctgaag
ctgctcgatcacggcggcaacgcctactacctcgccaaattcgccggcatcctcggcctc
aacatgcaggacatcggggcgctgcagaccggcatgagcgtcgagcagttcaaggccaag
cttttggccgccagagatagttga
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