Rhodopseudomonas palustris BisB18: RPC_3200
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Entry
RPC_3200 CDS
T00336
Name
(GenBank) Carbamoyl-phosphate synthase L chain, ATP-binding
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00907
Pinene, camphor and geraniol degradation
rpc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RPC_3200
Enzymes [BR:
rpc01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
RPC_3200
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GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
RnfC_N
HlyD_D23
NQRA
PTS_EIIA_1
PYNP_C
GARS_A
ATP-grasp_3
GCV_H
Motif
Other DBs
NCBI-ProteinID:
ABD88742
UniProt:
Q212E4
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Position
complement(3541578..3543572)
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AA seq
664 aa
AA seq
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MSVAPALQLTPFSSILIANRGEIALRIMRTARKLGYAVVAVYSDADADALHVRAADAAVR
IGGALPQQSYLNIEAIIAAAKQSGADAVHPGYGFLAENQDFAAACRDAGLLFIGPSAASI
AAMANKAGAKAIMRKAGVPCVPGYQGADQSDEAMAREAASIGFPVMIKAVAGGGGRGMRL
VEDAAAFAEALRGARSEAQGGFGDPTVILERAIVNPRHIEIQVFGDRYGHAVHLGERDCS
VQRRHQKLIEEAPSPAVSQALREEMGTVAVNAAKAIGYEGAGTLEFLLDGDGRFYFMEMN
TRLQVEHPVTEAITGLDLVELQLRIAAGEPLPLQQDDVQFRGHAIEVRLCSEDPAQDFMP
QSGRLALWQMPGELRVEHALQSGSAISPYYDSMIAKIVAHGDSRDEARRKLLHGLARTVA
FGVSTNCSFLAACLRHPSFAAGAATTGFIAQHRDALLAPEPDHDVPAAAVAALLLYVTDR
HAPRWRKGRSLAATFPCPLRIEIDGITLEPEVTRERDGCTIVRIGGNAVRFALDELSGDT
LRFRADGMSESIVYHRDGDALFVLRQGVTSAVRDLTRAAPARAAAAGGDGRLRAAMNGRV
VAVLVKPGDQVEAGQPVLTLEAMKMEHVHAAPISGIVSAIDVEEGEQVTTGRIVAEIEAM
SQQA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgctcccgctttgcagttgacgccgttctccagcattctgatcgccaaccgc
ggtgagatcgcgctgcgcatcatgcgcaccgcgcgaaaactcggctatgcggtggtcgcg
gtgtattccgacgccgacgccgacgcgttgcacgtccgtgccgccgatgcggcggtccgt
atcggcggcgcgttgccgcagcaatcctatctgaacatcgaagcgatcatcgccgcggcg
aagcagagcggcgccgatgcggtgcatcccggctacggcttcctcgccgaaaaccaggac
ttcgccgcggcctgccgcgacgccggcctgctgttcatcgggccctcggcggcgtcgatc
gcggcgatggccaacaaggcgggggccaaggcgatcatgcgcaaggccggcgtgccgtgc
gtgccgggctatcagggcgccgatcagagcgacgaagcgatggcgcgtgaggcggcttcg
atcggctttccggtgatgatcaaggcggtcgccggcggcggcggtcgcggcatgcggctg
gtcgaagatgccgcggcgtttgccgaagcgttgcgcggcgcgcggtcggaggcgcagggc
gggttcggcgatcccacggtgatcctggagcgcgcgatcgtgaatccgcggcacatcgag
attcaggtgttcggcgatcgctacggccacgccgtccatctcggcgagcgcgactgctcg
gtgcagcgccggcaccagaagctgatcgaggaggcgccgtctcccgcggtgtcgcaggcg
ttgcgcgaggagatgggcacggtcgccgtcaacgcggcgaaggcgatcggctacgagggc
gccggcacgctggaattcctgctcgatggcgatgggcggttctattttatggagatgaat
acgcggctgcaggtcgagcatccggtcaccgaggcgatcaccgggctcgatctggtggag
ctgcaattgcggatcgccgccggcgagccgctgccgttgcagcaggacgatgtccagttc
cgcggccacgccatcgaggtgcggctgtgttcggaagaccccgcgcaggatttcatgccg
caatccggcaggctcgcgctgtggcagatgccgggcgaattgcgggtcgagcacgcgctg
cagtcgggctcggcgatttcgccatattacgattcgatgatcgccaagatcgtcgcccac
ggcgacagccgcgacgaagcgcggcgaaaactgctgcacggcctcgcgcggaccgtcgcg
ttcggcgtctccacgaattgcagcttcctcgccgcctgtctgcggcatccttcgtttgcg
gccggcgcggcgaccaccgggttcatcgcccagcatcgcgatgcgttgttggcgcccgag
ccggaccacgatgtgccggccgccgctgtggcggcgctgttgctgtacgtcaccgatcgc
cacgcgccgcgctggcgcaagggccgctcgttggcggcgacgttcccgtgcccgctgcgg
atcgagatcgacggcatcaccctcgagcccgaggtgacgcgcgagcgcgacggctgcacc
atcgtgcgcatcggcggcaacgccgtgcgcttcgcgctcgacgagctgagcggcgacacc
ttgcgcttccgtgccgatgggatgtcggaatccatcgtctatcaccgcgacggcgacgcg
ctgtttgtgctgcggcagggcgtcacgtctgcggtccgcgacctgacccgcgccgcgccg
gcgcgcgccgccgcggccggcggcgacgggcggctgcgcgcggcgatgaacggccgcgtc
gtcgcggtgctggtcaagcccggcgaccaggtcgaggccgggcagccggtgctgacgctg
gaagcgatgaagatggagcacgtgcacgccgctccgatttcgggcatcgtttcggcgatc
gatgtcgaggaaggcgagcaggtcacaaccggccgcatcgtcgccgagatcgaggcgatg
tcgcaacaagcgtaa
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