Rhodopseudomonas palustris BisB5: RPD_0062
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Entry
RPD_0062 CDS
T00345
Name
(GenBank) Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase
KO
K04034
anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:
1.21.98.3
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00860
Porphyrin metabolism
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RPD_0062
Enzymes [BR:
rpd01000
]
1. Oxidoreductases
1.21 Catalysing the reaction X-H + Y-H = X-Y
1.21.98 With other, known, physiological acceptors
1.21.98.3 anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase
RPD_0062
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Motif
Pfam:
Radical_SAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ABE37302
UniProt:
Q13F37
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Position
71985..73535
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AA seq
516 aa
AA seq
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MRILLINVPHPSIGSRIPDDHLPPLGLLAIGGPLIDDGHDVRLIDGEFGPMSTSAIVEQA
VAFLPDAVLFGHSGSTSGHPVIAEVAHDLANAIPGVHIVYGGVFPTYHWRDIMADEPYVT
AIVRGEGEETALRLMAALARGESLGDVPGIAYREADETRATKPATVIRDLDAYRIGWELI
DHKRYSYWGGLRAVVVQFSRGCPHLCSYCGQRGFWTQWRHRDPVLFAKELARLHREQGVK
VINFADENPTVSKKIWRTFLEALIAEDVDLILVGSTRADDIVRDADILPLYKKAGWVRFL
LGLESTDEKTLELIRKDAATTTDREAIRLMRQHGILSMATWVVGFEEETDRDHWRGLRQL
LSYDPDQIQLLYVTPHRWTPYFNSVAGRRVIQTDRRRWDYKHQVLATRNMPPWRVLLWVK
WTELVLQGRPKAIWRVLFHRDVRLREAMRWYTRMGRRVWPYEIINFLLDRRLKNGPTVTQ
FWGASQDSEEQSMSSAGRGRPTGVKSRLRKTRTVIE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctgttgatcaacgtcccgcatccctcgatcggcagtcggattccggacgat
cacttgccaccactgggcctgctcgcgatcggcggacctttgattgacgacggccacgac
gtccgcctgatcgatggcgagtttggcccgatgtcgacatcggcgatcgtcgaacaggcc
gtcgccttccttcccgacgccgtcctgttcggccattccggctcgacctccggtcacccg
gtgattgccgaagtcgcgcatgatctcgcaaacgccatccccggcgtgcatatcgtttat
ggcggtgtctttccaacctaccactggcgggacatcatggccgacgagccatatgtcacc
gccatcgtgcgcggcgaaggcgaagaaaccgcactacgtctgatggccgctctcgcgcga
ggggagtctctcggcgacgtgccggggattgcttaccgcgaagcggacgaaacccgcgcc
acaaagcccgcaacggtgatccgtgatctcgatgcctaccggatcggctgggaactgatc
gaccacaagcgctacagctattggggcggactgcgtgccgtcgtggtgcaattctcacgc
gggtgcccccatctttgcagttactgcggacaacgcgggttctggacgcaatggcgtcat
cgcgatcccgtcctgttcgcaaaggaacttgcgcgtcttcatcgagagcaaggcgtcaag
gtcatcaacttcgccgacgagaacccgacggtttcgaagaagatctggcggacgttcctc
gaggcgctgatcgcggaagacgtcgacctcatcctggtcggatcgacccgagccgacgac
atcgttcgtgacgccgacattctgcctttgtacaaaaaggccggttgggttcgctttctg
ctcggtctggaaagcactgacgaaaagactctcgagctgatccgcaaggacgcggcgaca
acgaccgatcgggaagccatccgcttgatgcgccagcatggcattctttcgatggccacc
tgggtcgtcggcttcgaagaggaaaccgatcgcgaccattggcgagggttacgtcaactc
ctgtcatacgaccccgaccagattcagttactttacgtaacgccccaccgctggacgcct
tacttcaactctgtcgctggacggcgcgtgatccagaccgatcgacgacgatgggactac
aagcatcaggttcttgccacgcgcaacatgccgccctggcgtgtgttgctctgggtcaaa
tggacggagctggtgcttcaggggcgcccgaaagcgatctggcgtgtcctcttccatcgc
gatgtgcgactgcgcgaggcgatgcgctggtacacgcgcatgggacgtcgtgtttggcct
tacgagatcatcaacttcctgcttgatcgtcgcctgaagaatggaccaacggtcacgcaa
ttctggggcgcctcacaggattccgaggaacagtccatgtcgtccgcaggacgagggcgc
ccaaccggcgtgaaaagccgcctgagaaagacacggactgtcatcgaatga
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