Rhodopseudomonas palustris BisB5: RPD_0483
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Entry
RPD_0483 CDS
T00345
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00280
Valine, leucine and isoleucine degradation
rpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RPD_0483
Enzymes [BR:
rpd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
RPD_0483
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Gene cluster
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Motif
Pfam:
AMP-binding
AMP-binding_C
RPOC_hybrid
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ABE37721
UniProt:
Q13DW8
LinkDB
All DBs
Position
complement(557384..558895)
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AA seq
503 aa
AA seq
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MNANLFARLFDALDDPNRLAIETAAGETISYGDLIARAGRVANVLVARGVKTGDRVAAQT
EKSVEALVLYLATVRAGAVYLPLNTAYTLHELDYFITDAEPSLVVCDPSKRDGIAAIAAK
VKAAVETLGGDGQGSLTDAAAQASAEFTTVPRSADDLAAILYTSGTTGRSKGAMLSHDNL
ASNSLTLVDYWRFTPDDVLIHALPIYHTHGLFVASNVTLFARAAMIFLPKLDPDRIIDLM
PRATVLMGVPTFYTRLLQSPRLTQQATRHMRLFISGSAPLLADTHREWAARTGHAVLERY
GMTETNMNTSNPYEGERVPGAVGFPLPGVSARVTDPETGRELARGEIGMIEVKGPNVFKG
YWRMPEKTRSEFRDDGFFITGDLGKIDERGYVHILGRGKDLVITGGFNVYPKEIESEIDA
MPGVVESAVIGVPHADFGEGVTAVVVRDKGAAIDEAQVLSGLDGQIAKFKMPKKVIFVDD
LPRNTMGKVQKNVLRDTYADIYK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaatctgtttgcccgcctgttcgatgcgctcgacgacccgaacagactcgcg
atcgagaccgcggcaggcgagacgatcagctacggcgatctgatcgcgcgcgccggccgc
gtcgccaatgtgctggtggcgcgcggggtgaagaccggcgatcgtgttgcggcccaaacc
gagaagtcggtcgaggcgctggtgctgtatctggcgacggtgcgcgccggcgcggtgtat
ctgccgctcaacaccgcctacacgctgcatgaactcgattacttcatcaccgacgccgag
ccgtcgctggtggtgtgcgacccgtcgaagcgcgacggcatcgcggcgatcgccgccaag
gtgaaggccgcggtcgagacgctcggcggcgacggacagggctcgctgaccgacgcggcc
gcgcaggccagcgccgaattcaccaccgtgccgcgcagcgccgacgatctcgccgcgatc
ctctacacctcgggcaccaccggccgctccaagggcgcgatgctgagccacgacaatctg
gcgtccaactcgctgacgctggtcgactactggcggttcacgccggacgacgtgctgatc
cacgcgctgccgatctatcatacgcatggtctgttcgtggccagcaacgtcacgctgttc
gcgcgggcggcgatgatcttcctgccgaagctcgaccccgacaggatcatcgatctgatg
ccgcgcgcgaccgtgctgatgggcgtgccgacgttctacacccggctgctgcagagcccg
cggctgacgcagcaagccacccgtcacatgcggctgttcatttccggctcggcgccgctg
ctggcagacacccatcgcgaatgggcggcgcgcaccggccacgccgtgctcgagcgctac
ggcatgaccgagaccaacatgaacacctcgaatccctatgagggcgagcgcgtgcccggc
gcggtcggcttcccgctgcccggcgtgtccgcgcgcgtcaccgatccggagaccggccgc
gagctggcgcggggtgagatcggcatgatcgaggtgaagggcccgaacgtgttcaagggc
tactggcggatgccggagaagaccaggtcggaattccgcgacgacggcttcttcatcacc
ggcgatctcggcaagatcgacgagcgcggctatgtccacatcctcggccgcggcaaggat
ctggtgatcaccggcggcttcaacgtctatccgaaggaaatcgagagcgagatcgacgcc
atgccgggggtggtcgaatccgcggtgatcggcgtgccgcatgccgatttcggcgaaggc
gtcaccgccgtggtggtgcgcgacaagggcgccgccatcgacgaagcgcaggtgctgagc
gggctcgacggccagatcgccaagttcaagatgcccaagaaggtgatcttcgtcgacgac
ctgccgcgcaacaccatgggcaaggtgcagaagaacgtcctgcgcgacacctacgcggat
atctacaagtaa
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