Rhodopseudomonas palustris BisB5: RPD_1162
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Entry
RPD_1162 CDS
T00345
Name
(GenBank) hydrogenase (NiFe) small subunit (hydA)
KO
K06282
hydrogenase small subunit [EC:
1.12.99.6
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00633
Nitrotoluene degradation
rpd01120
Microbial metabolism in diverse environments
rpd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
RPD_1162
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RPD_1162
Enzymes [BR:
rpd01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
RPD_1162
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Motif
Pfam:
NiFe_hyd_SSU_C
Oxidored_q6
Motif
Other DBs
NCBI-ProteinID:
ABE38400
UniProt:
Q13BY9
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Position
1322432..1323565
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AA seq
377 aa
AA seq
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MGAETETFYEVIRRQGITRRSFVKFCSLTATSLGLGPIGASQIAQALETKPRIPVIWMHG
LECTCCSESFIRSAHPLVKDAVLSMISLDYDDTIMAAAGHQAEAILEETRTKYKGQYILA
VEGNPPLNEDGMYCIDGGRPFVEKLKEMADDSMAVIAWGACASWGCVQAAKPNPTQAVPI
DKVIKNKPIIKVPGCPPIAEVMTGVVTYVTTFGKLPELDRQGRPKMFYSQRIHDKCYRRS
HFDAGQFVEEWDDDAARKGYCLYKMGCKGPTTYNACSTVRWNGGVSFPIQSGHGCIGCSE
DGFWDQGPFYERLTTINQFGIEANADKIGATAAGVVGAAIAAHAAVTTVRNLSRRKEVPA
GGDGNGKSSGSSNGTSA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcagagaccgaaaccttctacgaggtgatcaggcggcagggcatcacccggcgc
agcttcgtcaagttctgcagcctcaccgcgaccagcctcgggctcgggccgatcggcgcc
agccagatcgcgcaggcgctggagaccaagccgcgcatcccggtgatctggatgcacggg
ctggaatgcacctgctgctcggaaagcttcatccgctcggcgcatccgctggtcaaggat
gccgtgctgtcgatgatctcgctggattatgacgacaccatcatggccgccgccggtcat
caggccgaggcgatcctcgaggaaacccgtacgaagtacaaaggccaatacatcctcgcg
gtggaaggcaatccgccgttgaacgaggacgggatgtactgcatcgacggcggccggccg
ttcgtcgagaagctgaaggaaatggccgacgattcgatggcggtgatcgcctggggcgcc
tgcgcctcgtggggctgcgtgcaggccgccaagccgaacccgacccaggccgttccgatc
gacaaggtgatcaagaacaagccgatcatcaaggtgccgggctgtccgccgatcgccgaa
gtgatgaccggcgtcgtcacctacgtcaccactttcggcaagctgcccgagctcgaccgc
cagggtcggccgaagatgttctactcccagcgcatccacgacaaatgctatcgccgctcg
catttcgacgccggccagttcgtcgaggagtgggacgacgatgcggcgcgcaaggggtat
tgcctgtacaaaatgggctgcaagggcccgaccacctacaatgcgtgctcgacggtgcgc
tggaacggcggcgtgtcgttcccgatccagtccggccacggctgcatcggctgctcggaa
gacggcttctgggatcagggaccgttctacgagcgtcttaccaccatcaatcagttcggc
atcgaagccaacgccgacaagatcggcgccacggcggccggcgtggtcggcgccgccatc
gccgcgcatgcggcggtgaccaccgttcgcaacctgtcgcggcgcaaggaggtgccggcc
ggcggcgacggcaacggcaagtccagcggcagttcgaacggcacgtcggcttaa
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