Ralstonia pickettii 12D: Rpic12D_3162
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Entry
Rpic12D_3162 CDS
T00925
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf00260
Glycine, serine and threonine metabolism
rpf00630
Glyoxylate and dicarboxylate metabolism
rpf00785
Lipoic acid metabolism
rpf01100
Metabolic pathways
rpf01110
Biosynthesis of secondary metabolites
rpf01200
Carbon metabolism
Module
rpf_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rpic12D_3162
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Rpic12D_3162
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Rpic12D_3162
Enzymes [BR:
rpf01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
Rpic12D_3162
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ACS64429
UniProt:
C6BH55
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All DBs
Position
1:3333786..3336725
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AA seq
979 aa
AA seq
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MNAPHPASSALAAERPTLADLEARDAFSHRHIGPSADEQTAMLATLGYPSRAALIDAVIP
PAIRRQDGMPLGEFTQPLTEEAALAKLRGIAGQNRVVKSLIGQGYYGTHTPGVILRNILE
NPAWYTAYTPYQPEISQGRLEAMLNFQQMVIDLTAMDIANASMLDEATAAAEAMTLLQRI
GKSKSTVFFVADDVLPQTLEVVRTRAEPIGVQVVTGPAADAAKHDAFGVLLQYPGANGAL
LGDLATYQALTDAVHAAGGLVVAAADLLALTLLAAPGEWGADVVIGNTQRFGVPFGFGGP
HAGYMAVRDAFKRSMPGRLVGVTIDAQGNPAYRLALQTREQHIRREKATSNICTAQVLLG
VMASMYAVYHGPQGLKRIAQRVHRLTATLAAGLRAIGYTLEADAFFDTLTVATGPRTANL
HIAAQAHGINLRQIDDARLGISLDETVTRADVVALWEVFAHAAHAAAPDFDQTEAGVTDA
YPASLIRQSAYLTHPVFNAHHSEHEMLRYLRSLADKDLALDRTMIPLGSCTMKLNATAEM
LPVTWPEFSNIHPFAPADQTVGYREMIDQLEQMLCAATGYAAVSLQPNAGSQGEYAGLLI
IHAYHASRGEAHRNVCLIPSSAHGTNPASAQMAGMQVVVVACDERGNVDLPDLEKKAAEH
SKNLAAIMITYPSTHGVFEEGVKRVCEIVHSHGGQVYVDGANMNAMVGTAAPGHFGGDVS
HLNLHKTFCIPHGGGGPGVGPVAVGAHLAPFLPGRAASGEDASQNIGNVSAAAFGSASIL
PISWMYIAMMGAAGLTAATETAILSANYVAKRLAPYYPVLYTGAHGLVAHECILDIRPLQ
KESGISNEDIAKRLMDFGFHAPTMSFPVPGTLMIEPTESEPKVELDRFIDAMIAIRGEVD
KVISGEFDREDNPLKHAPHTAAVVMADDWSHKYTREQAAYPVASLRARKYWPPVGRADNV
YGDRNLFCACVPMSEYAQD
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctccgcaccccgcttcctcggcgcttgccgccgaacgcccgacgttggctgac
ctggaggcgcgcgacgccttctcgcaccgccacatcggcccgtctgccgacgagcagacc
gccatgctggccacgctgggctaccccagccgcgccgcgctgatcgacgccgtgattccg
ccggccatccgccgccaggacggcatgccgctgggcgaattcacgcagccgctgaccgaa
gaagcggcgctggccaagctgcgcggcatcgccgggcagaaccgcgtggtcaagagcctg
atcggccagggctactacggcacgcatacgccgggcgtcatcctgcgcaacatcctcgag
aaccccgcctggtacacggcctacacgccgtatcagccggaaatctcgcagggccgcctg
gaggcgatgctgaatttccagcagatggtgatcgacctgacggcgatggacatcgccaat
gcgtcgatgctggacgaagcgaccgccgctgcagaagccatgacgctgctgcagcgcatc
ggcaagtcgaagtcgaccgtgttcttcgtggccgacgacgtgctgccgcaaacgctggaa
gtcgtgcgcacgcgcgccgagccgatcggcgtgcaagtggtgaccggcccggcggccgac
gcggccaagcacgacgcgttcggcgtgctgctgcaatacccgggcgccaacggtgcgctg
ctgggcgatctggcgacgtaccaggccctgaccgatgccgtgcacgccgccggcggtctg
gtcgtggccgccgccgatctgctggcactcacgctgctggccgcgccgggcgaatggggc
gccgacgtcgtgatcggcaacacgcagcgttttggcgtgccgttcggtttcggcggcccg
cacgccggttacatggccgtgcgcgatgcgttcaagcgctcgatgcccggccgactggtc
ggcgtgacgatcgatgcgcaaggcaacccggcctaccgcctcgcgctgcagacgcgcgag
cagcacatccgccgcgagaaggccacctcgaacatctgtaccgcgcaggtgctgctgggc
gtgatggcgtcgatgtacgccgtctaccacggcccgcaaggtctgaagcgcatcgcccag
cgcgtgcaccgcctgaccgccacgctggccgccggcctgcgcgcgatcggctacacgctg
gaagccgacgccttcttcgacacgctgaccgtcgccaccggcccgcgcaccgcgaacctg
cacatcgcagcacaggcgcacggtatcaacctgcgccagatcgacgatgcgcgactgggc
atctcgctggacgagaccgtcacgcgcgccgatgtcgtggcgctgtgggaagtcttcgcg
catgccgcccacgccgccgcaccggacttcgaccagaccgaagcgggcgtcaccgatgcg
tatccggcctcgctcatccgccagagcgcgtacctgacgcacccggtgttcaacgcgcac
cattccgagcacgaaatgctgcgctacctgcgcagcctggccgacaaggacctcgcgctc
gaccgcacgatgatcccgctgggctcgtgcaccatgaagctcaatgccaccgcagaaatg
ctgccggtgacgtggcccgagttctcgaacatccacccgttcgcgccggccgaccagacc
gtcggctaccgcgagatgatcgaccagctcgagcagatgctgtgcgccgccaccggctac
gccgccgtgagcctgcagccgaatgccggctcgcagggcgaatacgccggtctgctgatc
attcacgcctaccacgccagccgtggcgaagcgcaccgcaatgtgtgcctgatcccgtcg
tcggcgcacggcacgaacccggcatcggcgcagatggccggcatgcaggtcgttgtcgtg
gcgtgcgatgagcgcggcaacgtcgatctgcccgatctggagaagaaagccgccgagcac
agcaagaacctcgcggcgatcatgatcacctacccgtccacgcacggcgtgttcgaggaa
ggcgtgaagcgcgtctgcgagatcgtgcacagccacggcggtcaggtctacgtggacggc
gcgaacatgaacgccatggtcggcacggccgcgccgggccacttcggcggcgacgtctcg
cacctgaacctgcacaagacgttctgcattccgcatggcggcggcggcccgggcgtcggt
ccggtggccgtgggcgcgcacctcgcgccgttccttccggggcgcgcagcttcgggggaa
gacgcgagccagaacatcggcaacgtgtcggccgcagccttcggctcggcgtcgatcctg
ccgatctcgtggatgtacatcgcgatgatgggcgcggcgggcctgacggccgccaccgag
acggccatcctgtcggccaactacgtggccaagcgtctcgcgccgtactacccggtgctc
tacacgggcgcgcacggcctggtggcgcacgagtgcattctcgacatccgcccgctgcag
aaggaatctggcatcagcaacgaagacatcgccaagcgcctgatggacttcggcttccac
gcgccgacgatgagcttcccggtgccgggcacgctgatgatcgagccgaccgaaagcgag
cccaaggtggaactggaccgcttcatcgacgcgatgatcgccatccgtggcgaagtcgac
aaggtgatctcgggcgaattcgaccgcgaagacaatccgctcaagcacgcaccgcacacc
gcagccgtggtgatggccgatgactggtcgcacaagtacacgcgtgagcaggccgcctac
ccggtcgcatcgctgcgcgcgcgcaagtactggccgccggtcggccgcgccgacaacgtc
tacggcgaccgcaacctgttctgcgcctgcgtaccgatgagcgagtacgcgcaggattga
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