Ruditapes philippinarum (Manila clam): 132714496 Help Entry 132714496         CDS       T09557                                  Name (RefSeq) nucleoprotein TPR-like   KO K09291   nucleoprotein TPR Organism rphi  Ruditapes philippinarum (Manila clam) Pathway rphi03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:rphi00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     132714496  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rphi03019]     132714496 Messenger RNA biogenesis [BR:rphi03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      132714496 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_MLP1_2 ATG16 Cnn_1N RBD-FIP SlyX Motif Other DBs NCBI-GeneID:  132714496 NCBI-ProteinID:  XP_060553373 LinkDB All DBs Position Unknown AA seq 2424 aa AA seqDB search MAGPMEVEISKILESNDFSSVQEEAKSKILSYISRKHKEDEDVRANLTKLRVNSEQQYCD IEKQLITSNEKLKEESSANEQLRQQIAELEKKYNEASQKLRGLEDTQEGNLSTQLRLTKV NEQLECEKREFVILLEKRNREIDDLNDEMKKMSRKLSEMNTAKCEAIAKFDEVRSGEINK EFQVKRLEQEVQNLQKQIDWLNNDATEKNKELMAVKREKSSKVLEIQSELETKTEECSIL QTTVESLRKTNSEQSQRIETFIQRIKDMQDNSIQSEEKFKQEINARANLAELYKGKAEEN EAQAKELFSAVTELRKMLKEAADAHTDMENEKDEEIQKVRDVLDQKDKRIERLEQELVNA NELLSAMKSKGMSEDKVEAMFPTAAATSKMLKSGMTLTQIYNEYVQATDALQFEKDENKR LNSYLDQILQEIDEKAPMLKKQREDYEIALKSIDQMTRQLDAAMLDCQTLRAETDESHRK SSHLTRENQKLQQQIRDLSEQVKYLVKEMEEVKGGRVVKDDGSSPEISSSSRLISDRLVT FRNIDELQEQNQKLLAVIRELSDKQEEEENMAVDAKTKELKEQFEQAQEELAELKDSRLR QSEMVESIVRQRDMYRILLQQANASPTPDMSLSRPGEMKSPVKLQKSPGPDAMEKKLDEA NKALKQHQMEFMSYKKDKMENDKIMKEQVDKLRQEATDLRLQNAKLSSQLEFAAERNKAA VSNTEGYKKEIAVLRDKLQKYTASVAKHEQTSNSLRQELMAAQEQIAKAEARVENLRAEK DLIRSSEQRVMIELECIRRERQTQTMLMANLQAIQNNLERNEKETKNTLGKQIETLDREK TFLKKRLETEDRQHSAMTKHWERQVQELRGQLEQELKSHQNTKNQIEPKEKELKETREKI KMISTKLADAETRLETLTSGTGGDKGDELKELRVNLEQSRAEVTSLQTQLQKAKQHTEQY KTMAESLQQTIDQQNQTSEQFKTTLEERLREVEEERRHLSSQIDSLEAERQDLLNENMRI TEESQKLNADLLKKLAEVENELHAVTDRRETAIALEMSAKQECENQTKLAADAQDKYERE LMLHAADVEALSAAKKQLEGFNEKLREKDEQAKIAEAQLKEFKTSSEEREKMLKEERDKM AARVKDLVQETQALHQQMNKLSNQVVSVQERAAATPRKYGGATQAQDDSSKSSEQLLEVV RYLRKEKDIAEGKLDVVETECSRLKQRCDNLEKQLESVNTQLSEEREQRQAETQTAAQHA ELMHRVESYNLLHDSNKLLREERDHAQSQLSQAEAKLSKLEETIRPLQTEIRELQSQRDA LAIDKKSILSEVERWRNRTNQLIEQSHKTDPEEHKRLIQEKEELRKQVISITEDLHKAKA DVTKAGIEVAKLQRQISQQKEEFNKQTEEMKAEHERDNAEKAKTIVQLKRVGRKYKDQAE ATTKEFEEYKAKQESVEQTEKQTEKQFQANAEKIKELEQTIKEMEENLKTAKNSIVEMTG KNTITENKLKSVETANQTLESNLKELEEKIRNAEQTIITVRAEKEDIEQMIGQKSQQQEV ESAKILQLQQQINKHSEDFNKLKEEKSEVEKKLTKAHHMLQSAKTRLQSLKETNDRLTSD RLEMRKRISEHSSNTSLADETEGMESRVKELESQIDTLKQEVTSRDNTIAEQQKNMQQLQ NKLDSQKLAPSQPAAQVSRSGGSVAPDRTSSSPSEPPKTANIRPIASSPASIKPQTVPVQ PQSAASKVMASIRPMAIAATSVSTITTGTPTATVMPTTAISQQEVPEEEVLAPVQQLFPQ STSVGGRPTQQVHRVIPTQESTSVESLPESTTETVVVEPVQSTSRETPVVAMQQSVKRQR EEVESPVDDTVVKRTRVSTSEPDSSEIPEITISEVAPQEAPEDVQEAAEGDADQEPEETE AQTQGEDTEEGSQLPESDQQVEEQAEGDEMQDEEGMGQEHRVSREMQEDDDDDEAVIIVE SEDEEDQAEEDGDDEEDDDEEEDNDDDEEEDDDGDDDDDQEGMEYGDEEQVQEGFDVGQG DVNEMNEQGYTDEGGDMQSGGQNQDDDDVVIIDEDDDDEGDAGVMDSQEPDSLPASQSSS QTSQQSLVPPLQPLMPPERQLSTGGRNQLTPFMIGATGAGFEVDLDDCTVPSTPTLNVPR RMDGFAEAVSSPQVSQRFIFGSGGSEQNLSLIEAGAALGMGMDDTRMDLSQLEEGSGRSV PSTPLHSTAPVTIITEAADTIPSQSETAVTSVSQSELGTQEEAESGLEQFDEGGVTVDLE GEEFEGEQGEEDSQEGLYDQSQDTEDRTQSETEKEESGDVEASSSKEDVPVSSSTDRQTD ASKPKIQKIIWDAPAPSQTTVSPVVNVSSPIPTVTQMGQQQQYRQSRGGPQRGIPTRGGG FQRGQRRPMRSRGGMMYQRRPPMY NT seq 7275 nt NT seq  +upstreamnt  +downstreamnt atggcggggcccatggaagtggagatttccaaaattttagaatcaaatgacttttcttcg gtccaagaagaagcaaaaagtaaaattttaagttatatttcaagaaaacataaagaagat gaagatgtacgagctaatttaacgaaactacgtgtaaattcagagcaacaatattgtgac atagaaaagcaacttataaccagtaatgaaaagttgaaggaagaatcttcagccaatgag cagttaagacaacagattgcagaactagagaaaaagtataatgaggcttctcagaaactt cggggtttggaagacacacaggaaggaaatctctcaacacagttacggttaacaaaagtc aatgagcagttggaatgtgagaagagagaatttgttatactcctagaaaaaagaaacaga gaaatcgatgatttaaatgacgagatgaagaagatgtcgaggaagttgtcggagatgaac acagcgaaatgtgaggctattgctaaatttgacgaagtcaggagtggagaaatcaacaaa gaattccaggttaagagattagagcaagaagtacagaacttacagaaacagattgactgg ctaaacaatgatgctacagagaaaaataaagaactgatggctgtcaaacgggaaaagtcc agcaaggtactagagatacaatcagaactagagacgaagacagaggaatgtagtatactt caaacaacagtcgagtccttgaggaaaactaattctgaacaatctcagaggattgagacc ttcatacaaagaataaaagatatgcaagacaattcaatacagtcagaagaaaagtttaaa caagaaatcaatgcccgggccaatcttgctgaactgtataagggaaaagctgaggagaat gaggcccaggccaaagagctgtttagtgcagtcacagaactccggaaaatgctcaaggag gctgctgatgcccatacagatatggaaaatgaaaaagatgaagaaatacaaaaagtcagg gatgtgttggatcaaaaagacaaaagaatagagagattggaacaagagcttgtcaatgcc aatgagctgctatctgctatgaaatctaaaggaatgagtgaggataaagtagaagccatg ttcccaacagccgcggccactagtaaaatgttaaagtctggtatgaccttgacccagata tataatgaatatgtacaggcgaccgatgctctacagtttgaaaaggatgagaacaaacga ctaaattcatacctggatcaaatacttcaggagatagatgagaaggcaccaatgttgaag aaacagagggaagattatgagatagccttgaagagtatcgaccagatgaccagacagcta gatgctgctatgttggactgccaaacattacgagctgaaactgacgagagtcaccgaaag tcgtcacatctgacacgggagaaccaaaaactgcaacagcaaatcagagatctctctgag caggtgaagtacttggtgaaagagatggaagaggttaaaggtgggcgtgtagtgaaagat gatggatcttccccagagattagcagttcttccaggctcatatctgacaggcttgttacc ttcaggaacattgatgagttacaagaacagaaccagaagttactggcggtgatcagggag ctgtctgataaacaagaggaggaggagaacatggctgtagatgctaaaacaaaggaacta aaagaacaattcgagcaggcccaggaagaactggcagaattaaaagattctaggttacgg cagtcagaaatggtggaatctattgtgcgacagagagatatgtatagaatacttcttcag caagccaatgcttcccctacaccagatatgagtttgtcacgccctggagaaatgaagagt cccgttaaattacaaaaaagtcccggtccagacgctatggagaagaagttggatgaagcc aataaagcattgaaacaacatcagatggagtttatgtcatacaaaaaagacaaaatggaa aatgataagattatgaaagagcaggtagataagttaagacaggaagccacagatctacgt ctgcagaacgctaaactttcatcacagctggaatttgctgcagagaggaataaagctgcc gtgagtaataccgagggttacaagaaagagatagccgtgttgagagacaagcttcagaaa tatacagcctccgttgctaaacacgaacagaccagtaactcacttagacaggagctgatg gcggcccaggagcagatagcgaaggccgaggctcgtgttgaaaatctccgagcggagaag gacctgatcagatcctcagaacagagagtgatgattgagcttgagtgtatacgtagagag agacagacacagaccatgttgatggctaatctacaagcaatacagaataatttagagaga aatgaaaaggaaacaaagaatactttaggaaaacaaatcgagacattagatcgtgagaaa acatttttaaagaagagattagaaacagaggacagacaacattcagcaatgaccaaacat tgggagcgacaagtacaggagttgagaggtcagttagaacaagaattaaaaagtcatcag aatacaaagaatcagatagaacccaaagaaaaagaattaaaggaaacaagagaaaagatt aaaatgatctcaacaaagctggctgatgctgaaactagactggaaactctaacatctggc acaggtggggataagggtgatgaattgaaggaattgagagttaatcttgagcaatctcgt gcagaggtcacaagtctacagacccagttacagaaggccaaacagcacactgaacaatac aaaacaatggcggaaagtttacaacaaactatagaccaacagaatcagactagtgaacaa tttaagactacattagaagaaaggctacgagaagtagaagaagaacgtcgtcatctgtca tcacaaattgatagtctcgaagcagagagacaagacctactgaatgagaacatgagaatt acagaggagagccaaaaattgaatgcagacttgcttaagaagcttgctgaagttgagaac gaacttcatgcagtgaccgacagacgggaaacagccatagctctggagatgtcggctaaa caagagtgcgagaaccagacaaaacttgcagcagacgctcaagacaagtacgagcgtgaa ctgatgttacatgccgcagatgtcgaggctcttagtgcagctaagaaacaactggaagga tttaatgaaaaactgcgagagaaagatgaacaggctaaaatcgcagaagctcaattgaaa gagtttaagacatcatcagaagagagggagaagatgttgaaggaggagagagacaaaatg gctgccagggtgaaggatttggtgcaggaaacacaggcccttcatcaacaaatgaacaag ttgagtaaccaggtggtttcagttcaggagagagcggctgccacacccaggaagtatgga ggggcaactcaagcccaggatgatagctcaaaatcctcggaacaacttcttgaagttgta agatatttaagaaaggaaaaggatatagccgagggcaagttagatgttgtagagacagag tgttccagactgaaacaacgatgtgacaatctagagaaacagctcgaatctgtgaacact cagttgtcagaggagagggaacagagacaggccgagacacaaactgcagcgcaacatgct gagttgatgcacagagtagagtcatacaacctgttacatgatagtaataaactactgaga gaagaaagggatcatgcacagtctcaactttcccaggccgaggctaagctatcaaaactt gaggaaacgatccgacctctacaaacagaaatccgtgaactacaatcccagcgagatgcc ctggctatagataaaaagtcgatattatccgaggtggagagatggcgtaacagaaccaat cagcttatagaacaatcgcacaaaacagatcctgaagagcataaacggctcattcaggag aaggaagaattgagaaagcaggtgatcagtattacagaggatttacataaagcaaaggca gacgtaacaaaggcaggaattgaagtagcaaaattacaacgacagatatcacagcaaaag gaagaattcaacaaacaaactgaggagatgaaggcagaacatgagagagacaatgctgag aaggccaaaactattgtacagttgaagagagttggtagaaagtacaaggaccaagccgag gccaccaccaaggagtttgaggagtacaaggctaaacaagagagtgtagaacagacagaa aaacagacagagaaacaatttcaagcaaatgctgagaaaatcaaagagttagaacagaca ataaaagaaatggaggaaaatttgaagacagcaaagaacagtattgttgagatgacaggc aagaacaccataactgaaaacaagttgaaaagtgtggaaactgctaatcaaactctagaa agcaacttgaaggaattggaggagaaaataaggaatgctgagcaaacaattatcacagtg agagcagagaaggaggatatagagcaaatgatcggacagaaatcacaacaacaagaagtt gagtcggccaaaatcttacaactacaacagcaaataaacaagcatagtgaagatttcaat aagttaaaagaggagaaatccgaggttgagaagaagttgacaaaagctcaccacatgctc cagtcggccaagacaagactgcagtcattgaaggagaccaatgacagactgaccagtgat aggttggagatgaggaaacgaatatctgaacattcttcaaatacttctcttgctgacgag acagagggtatggaaagtcgagtcaaggagctggagtcacagatagataccttgaaacaa gaagtcacttctagagataataccattgctgaacaacagaaaaatatgcagcagttacaa aataagttagatagtcagaagcttgctccgtcacagccagcagctcaggtgtcaaggtca gggggaagtgtcgcccctgataggacaagttcctcaccatcagaaccaccaaagactgcg aacattcgccctatagcctctagtccggcaagtatcaagcctcagacagttccagtacag cctcagtcagccgcctctaaggtgatggctagcatacgacccatggctattgccgctact tctgtgtccaccattacaactggtacaccgacggcaacagtgatgcctacaacagctatt tctcaacaagaagttccagaagaagaagttttagcaccagtacagcagttgttcccacag tctacatcagttgggggcagacctacacaacaagttcatagagtcattcctactcaagag tccacaagtgttgaaagcttgccagagagtaccacagagactgtggtggttgaacctgta cagtccacttccagagaaactcctgtggttgccatgcaacaatctgttaaacgtcagaga gaggaagttgagagccctgtagatgatactgttgtcaagagaactagagtttctacatca gagcctgattccagtgagataccagaaataacgatatctgaggtagcgccccaggaggca ccagaagatgtacaagaggccgcagaaggtgatgcagaccaggaacccgaggaaactgag gctcaaactcaaggggaggacacggaggaaggaagccagttaccagagtctgaccaacaa gtagaagagcaagctgagggtgatgaaatgcaggacgaggaaggtatgggtcaggaacac agagttagtagagagatgcaggaagatgatgatgatgacgaggctgtcattattgtagaa agtgaagatgaggaagatcaggctgaagaggatggtgatgatgaggaagatgatgatgag gaggaggacaatgatgatgatgaagaagaagatgatgatggtgatgatgatgatgatcaa gaaggaatggagtatggagatgaagaacaagtacaggaagggtttgatgttggacagggg gatgtaaatgagatgaatgaacaaggttacacagatgaaggaggtgatatgcagtcagga ggacagaatcaggatgatgacgatgttgttattatagatgaggatgatgatgatgaggga gacgctggtgttatggattcccaggaaccagactcactgcctgcaagccagtctagcagt cagaccagtcaacagtcactggttcccccattacaacctctcatgccacctgagagacaa ttgtctactggagggaggaaccagcttacacctttcatgattggggcaactggtgcagga tttgaagttgaccttgatgattgtacagtgccaagtacccctacgctaaatgtaccacgt agaatggatggttttgctgaggctgtcagttccccacaggtgtcacaaaggtttatattc ggcagtggaggcagtgaacagaacctgtctttgatagaagccggggcagctctaggaatg ggtatggacgacacacgcatggatttgtctcagttagaagaaggatctggccgcagtgta ccctccacaccgctacactccactgccccagttactattataactgaagcagctgatacc attccaagccaatcagaaacagctgttacatctgtcagccaatcagaactagggacacag gaggaggcggagtctggtttagaacagtttgatgaaggcggtgttactgtagatttagaa ggtgaggagtttgagggtgaacagggtgaagaagactcacaggaagggctttatgatcag agtcaagataccgaagaccgaactcagtcagaaacagagaaagaagaatctggtgatgtt gaagccagttcaagcaaggaggatgttcctgtaagctcaagtacagaccgacaaacagat gcttcaaagcccaaaattcagaagataatttgggatgctccagcgcccagtcagaccaca gtcagccctgtagtaaatgtcagctccccaattccaactgtcacacagatgggtcaacag caacaatatagacaaagtcgaggaggtccacagaggggtatacccaccagaggaggaggc ttccagaggggtcaaaggcgaccaatgagaagtcgtggtggaatgatgtatcaaagaaga cctccgatgtattga

DBGET integrated database retrieval system