Ruditapes philippinarum (Manila clam): 132717714
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Entry
132717714 CDS
T09557
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00270
Cysteine and methionine metabolism
rphi01100
Metabolic pathways
Module
rphi_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
132717714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132717714
03032 DNA replication proteins [BR:
rphi03032
]
132717714
03036 Chromosome and associated proteins [BR:
rphi03036
]
132717714
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rphi02048
]
132717714
Enzymes [BR:
rphi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
132717714
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
132717714
DNA replication proteins [BR:
rphi03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
132717714
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
132717714
Prokaryotic defense system [BR:
rphi02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
132717714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
BAH
DNMT1-RFD
zf-CXXC
DMAP_binding
Motif
Other DBs
NCBI-GeneID:
132717714
NCBI-ProteinID:
XP_060557247
LinkDB
All DBs
Position
Unknown
AA seq
1557 aa
AA seq
DB search
MPGRTNASVSISEDITKKLECLDVELKDGDITQKGYWKKKWRLCGDLISEDMKQKVGDVE
AELQEQLMTEKGYFKRLEQLFESFWKSADLNSINKPRETGKFKETEGSPDKNGHNGNTES
GGGDFDEMETETKKNDDHTNGDGQVENEKGDNSAKDTEVGDVKKEEEMETEEVTPEKNSD
KKKKSKGRQQKKEKKSDKQQSIAAMFSKASSSQKRKSSANEDIKVEQEVEEIGSPEEKVA
KKPRIDDDDNDTDEKRELREKQEEVSKPSFAKIPMKCLQCKQLLDDPDLRTFAGPPENAV
EEFVALTDPKLSLFTGEEDNIDSYDERPQHKITQFSVYDKNTHLCPFDTGLVEKNIELYF
SGYVKPIYDENPDPEGGVPTQNMGPINAWWTAGFDGGEIPLIGFSTAFAEYILMKGSESY
SPFMDQMQEKINMSKIVIEFLVKTPEATYEDLLNKIQTTVPPAGCPSFTEDSLLRHAQFV
IDQVQSFDESADEDEDLIITTPCMRALIKLAGVTLGKRRAIRKDKVVKKVAPKQTLATTT
PLVSAMFDSMFQGQIDDKALKESKKRRCGICEACQSPDCGKCVACKDMIKFGGSGRAKQA
CHERRCPNMAVKEAEDDDLLDEENDDKLMFENKHQKDVIAQHKASANKQVELKWKGSPIK
EEGKRKFYQTVLLDGNEVSVGECVSVKPDDPTVPFYIARIAYMWEDSKGVKKFHAHWFCR
GSDSVLGESSDPLELFLADDCEDSDLEYTVSKVQVIHHKADKNWSMLGGEEIEHPIKVDD
GKTYFYQKWYDSQYARFEDPPEVGEIPESIAHRFCDSCQRLNALRKKEMPALGEEIKAEE
GKDSYTYYASVSRDGFDFKVGDCCYLMPSSYDFGVKPAPPKKIKVDKTAVDEELYPEAYR
KSDYIKGSNDEVPEPFRIAQIEQIFIKESGTSFPSLDKIKLKVKKFYRPENTHKGASAGH
QSDCNQLYYTDEDVTVDFSLVRGKCTVVFTEELDPNRDNDFLFGRDKFYFSEAYNSKTKS
FEEPPTKARMMGSKGKGKGKGKGKGKATTQTDTASEVKQEVKRLRTLDVFAGCGGLSEGF
HQAGVAESRWAIEKEEPAAQAYRLNNPGSTVFTDDCNLLLRLVMDGEKTDHVGQKLPQKG
DVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYLSYCDYYRPRFFLLENVRNFVSYK
KSMVLKLALRCLIQMGYQCTFGILQAGSYGVAQTRRRAIILAAAPGEKLPFYPEPLHVFA
PRAMALSVVVDERKFVSNITRMDAAPFRTITVRDTMSDLPEIKNGAKAQEISYNCDSQTH
FQRIIRGKQHQPVLRDHICKDMNPLVHARMQHIPLAPGSDWRSLPNMEVRLSDGNKCKKL
RYTHHDKKNGKSENGNLRGVCSCAEGNACDLMDRQFNTLVPWCLPHTGNRHNHWAGLYGR
LEMDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFYGTILDRHRQV
GNAVPPPMARAIGLEIKKCLITKATEEPCTDNMTEGKQESKVEDMEVKKEDKPGSSC
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgcctggaagaaccaatgcatcagtgtcgatatctgaagacataacgaaaaaactagaa
tgtttagatgttgaacttaaagatggagacattacgcagaagggatactggaagaaaaag
tggcgactgtgtggtgatcttatatcggaggatatgaaacaaaaagttggcgacgttgaa
gctgagctacaagaacagttaatgactgagaaagggtattttaaacgcctggaacagctg
tttgagtcattctggaaatctgcagatcttaattcaatcaataaacccagggagactggc
aagtttaaagaaactgagggaagtccagataagaatggacacaatggaaatacagaatct
ggcgggggtgattttgatgagatggaaactgaaactaaaaagaatgacgaccataccaat
ggtgatggtcaggttgaaaatgaaaagggagataattctgctaaagatacagaggttgga
gatgtgaaaaaggaagaagaaatggaaactgaagaagtaacaccagagaagaattcagat
aaaaagaagaaaagcaaaggtcgtcaacaaaagaaggaaaagaaatctgataagcaacaa
tcaattgcagctatgttttctaaagcgtcttcaagtcagaagcgtaagtcgtccgccaat
gaagatattaaagtagaacaagaagttgaagagataggttcaccagaagagaaagttgct
aaaaaaccaagaattgatgatgatgacaacgacactgatgagaaaagagagctcagagag
aagcaagaggaagtatcaaaaccaagctttgctaagatcccgatgaaatgtttacagtgt
aaacagcttctagatgacccagatctcagaacttttgctggacctcctgaaaatgctgta
gaggagtttgttgccctgacagatccgaaactgtcgttgttcactggggaggaggataat
attgacagttatgatgagcggccgcaacacaagatcacacagttcagtgtttatgacaag
aatacacatctttgcccatttgatactggactggtagagaaaaatattgaactatatttc
tcaggctatgtcaagcccatatatgatgagaatccagaccctgagggtggggttccaact
caaaacatgggaccaataaatgcatggtggacagcagggtttgatggtggtgagatacct
ttgataggatttagtacagcttttgcagagtacattttgatgaaaggaagtgagagttac
tccccttttatggaccaaatgcaggagaagatcaacatgagtaagattgtgattgaattc
ctggtgaaaactccggaagccacatatgaagatctgctgaataaaatccagacaacagta
cctccagcaggttgtccctcattcaccgaggattcacttttgaggcacgctcagtttgta
atagaccaggtacagagttttgacgagtccgctgacgaagacgaggacttgattataacc
acaccttgcatgagagctcttataaaacttgctggtgtcacacttggcaaaaggagagca
ataaggaaagataaagtagtgaagaaggtggcaccaaagcagacattagcaacaacaact
ccccttgtcagcgcaatgtttgacagtatgttccagggacagattgatgacaaagctctg
aaggaatccaagaaaagacgatgtggaatttgtgaggcatgccagtctccagactgtgga
aagtgtgtggcttgtaaagacatgatcaagtttggtggcagtggccgagcgaaacaggcg
tgtcacgagagacgatgtccgaacatggccgtgaaggaagcagaagatgatgatttactg
gacgaggagaatgacgacaagttgatgtttgaaaacaaacatcagaaagatgtcatagct
caacataaagccagtgccaacaaacaggttgaattgaaatggaaaggttcacctatcaag
gaagaaggcaagagaaaattctatcagacagtgttgctggatggaaatgaggtatcagtt
ggtgagtgcgtctctgttaaaccagatgaccctactgtaccattttatatagcacgtata
gcatatatgtgggaggacagtaaaggcgttaagaagttccacgctcattggttctgccga
ggaagtgattcggtacttggcgagtcatcagaccctctcgagctgttcctggcagatgat
tgcgaagattctgacttggaatatactgtgtcaaaagtccaggtaattcatcacaaagca
gacaagaactggtcaatgttgggaggggaggagattgaacatccaataaaagttgatgat
gggaaaacatacttctatcagaaatggtatgattcccagtatgccaggtttgaggatcca
ccggaagtgggggaaataccagaatctattgcccacaggttctgtgatagctgtcagaga
cttaatgctctaagaaagaaagagatgccagcacttggtgaagagatcaaggctgaagaa
ggaaaggacagttacacatattacgccagtgtctcccgggacgggtttgattttaaagtg
ggggattgttgttacctcatgccaagttcatatgactttggtgttaaaccagcgcctcct
aaaaagatcaaagtggataaaactgcggtggatgaagagctatatcctgaggcatacagg
aagtcggactatatcaaggggtcgaacgacgaggttccagaaccgttcagaattgcccag
atagagcagatatttatcaaagagagcgggacaagttttccttctcttgataaaataaaa
ctgaaagtgaagaaattttacagaccagagaacacacataaaggcgcctcagcaggacat
cagtcagactgtaaccaactttattatacagatgaagatgtgacagtagatttcagccta
gttagaggaaaatgtacagttgtatttacagaggaattagatcccaatagagataatgac
tttctgtttggtagagataaattctacttctccgaggcttacaatagtaaaacaaaatca
tttgaagaaccgccaactaaagcaaggatgatgggatcaaagggcaagggtaaggggaaa
ggcaaaggcaagggaaaggcaaccacccagactgatactgcatcagaagtgaagcaagag
gttaaaagactgagaaccttggatgtgtttgctggatgtggaggactttccgagggcttc
catcaagctggtgtggctgaatctagatgggctatcgagaaagaggagcctgctgcccag
gcatacaggcttaacaatccgggtagtacagtcttcacagatgattgtaacctgctactg
agacttgtaatggatggagagaagaccgaccatgttggccagaaactgccccagaaggga
gatgtggagttactgtgtggcggcccaccttgtcagggattttccggtatgaaccggttc
aacagccgtgaatactccaagttcaaaaactcgctaatttcctcatacctgagctattgt
gactactacagacctcgattctttctcctggagaatgttcgtaactttgtctcgtacaag
aagagtatggttcttaagctagctctccgctgcctcatacaaatggggtaccagtgtaca
tttggaatacttcaggctggtagttatggtgtagcacaaacccgtagaagggctattatt
ttagccgcagcaccaggagagaagctaccattctacccagaaccattacacgtgtttgct
cctagagccatggctctatctgttgttgtagatgagaggaagtttgtctccaatatcaca
aggatggatgctgctccattccgcacaatcacagtacgtgatacgatgtccgatctacca
gaaataaagaacggggccaaggcacaggagatatcttataattgtgactctcagactcac
ttccagagaattattcgtggaaagcaacaccagcctgtattaagagatcatatatgtaag
gacatgaaccctctagttcatgctcgtatgcagcatatcccactggcacctggctctgac
tggagatccctgcccaacatggaggtgcgactatctgatggaaataaatgcaagaaattg
agatacacacaccatgataagaagaatggtaaaagtgagaatggaaatttacgaggagtg
tgttcgtgtgccgagggaaacgcatgtgatctgatggaccggcagtttaataccctggta
ccttggtgtcttccgcacactggtaaccggcacaatcattgggctgggctgtatgggcga
ctggagatggatggtttctttagcacaacagtgaccaaccctgaacctatgggaaaacag
ggaagagttttacatcctgagcagcacagagtggtcagtgttagagaatgtgcccggtca
cagggtttcccagatacatacaggttctatggtacaatattagacaggcataggcaggtt
ggtaatgctgtcccaccacctatggcacgtgctattggacttgagatcaagaagtgtttg
atcaccaaagctacagaagaaccatgtacagacaatatgaccgagggaaagcaggaaagt
aaagttgaagacatggaagtgaagaaggaggataaacctggttcaagttgttag
DBGET
integrated database retrieval system
