Ruditapes philippinarum (Manila clam): 132728679
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Entry
132728679 CDS
T09557
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132728679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132728679
Enzymes [BR:
rphi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132728679
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
132728679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
CoV_NSP15_M
Motif
Other DBs
NCBI-GeneID:
132728679
NCBI-ProteinID:
XP_060570340
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MELKTYDLNPQFSINGLKFRFYSAAEIIALSVKEITNVETFDNLGHANVGGLYDPALGSS
EKFDSCSTCGLVSQNCPGHMGHIKLAIPLFNTVIFPTLYHLLKAVCFKCNRLCVEQTAEE
LFLAQCKLLDEGLVAEASDLQTIFAETGKAEKTEEIKVFTENALNERKNGNLKVTAVKNL
EAVKLEILKSFMKTHVKHHARCVHCTIRMPKLRMEYHSKIFMVGGNTVFSKNNESDDDDD
ESDDEDGEPRKKKQKMQSKSSGSRKSSDVTLLTPYNVRESLRKVWKLESEVLKRMYPSIM
SAADLECPTDIFFVEVVPIPATKFRPISMMSGRKYEHPQTSNLLRLLKCNYIVQEILWEM
EKASANTNTEESTKYSRDVNQIPGKTLVDKLSNALTRLQSAANAVIDSDLDKLSDDVRPG
IKQVIEKKEGLFRKNMMGKRVNYAARSVITPDPNINTNEIGIPEVFAKVLSYPQPVTPWN
VHELRQAVINGPDVHPGATHVIDESGWVTRLDARFPDKREALAKQLLTPTVTKHKTLNGV
KKVQRHLKNGDVLLINRQPTLHRPSIQAHKARVLKGEKTLRLHYANCKAYNADFDGDEMN
AHFPQNEIARSEAYNLASTDFQYLVPKDGTPLAGLLQDHMVSGVSLTIRGRFFTKDDYCR
LVYGALIDKNGPVKMLPPSIIKPVKLWSGKQVLSTVVLNVIPDGKPALSLDGRAKVPEKS
WIKVQKSDFDDPLKYMRESEDVIIRQGELLCGVLDKGHYGPSNFGLIHCCYELYSGAVAG
QMLTCFGRLFMNFLQWRGFTLGVEDILVTKQGDKKRRRLIKKSPACGEVSAKKALELDQE
CGEAELLSALKNAHFNKEERQMRELDQNMRSQTNTIQNDIVNACMPNGLEKLFPDNNLQL
MVQSGDR
NT seq
2722 nt
NT seq
+upstream
nt +downstream
nt
atggagctaaagacatacgatttaaatcctcagttttcaatcaatgggttgaaattccga
ttttactctgcagcagaaatcattgcattgagtgtgaaggaaattacaaatgttgaaaca
tttgacaatctcggccatgccaatgtgggtggactgtatgacccagcacttggtagtagt
gaaaagtttgattcgtgttccacttgtgggctcgtcagtcagaactgtcctggacatatg
gggcatataaaactggccataccattgtttaacacagtcattttccctactttataccat
cttttgaaggcagtgtgttttaagtgtaacagactatgtgtggagcagacagccgaagag
ttatttttagcacagtgtaagttactggatgaaggtctggtagccgaggccagcgatcta
cagactatatttgcagagactggaaaagctgagaagactgaagagataaaagtttttaca
gaaaatgctttaaatgagagaaaaaatggtaatttgaaggtgacggctgtaaagaatttg
gaagctgtgaaactagagatactgaaaagttttatgaaaacacacgtcaaacatcatgca
cgatgtgtacactgtacaatacgtatgccaaagcttagaatggagtaccactcgaagatc
tttatggtgggaggaaacacagtatttagtaaaaataatgaaagcgacgacgatgatgat
gaaagtgatgatgaagatggtgaaccaagaaagaagaaacaaaaaatgcaatcaaagagt
agcggcagtagaaagagtagtgacgttacccttcttactccatataatgtcagagagagt
ttacgcaaggtgtggaaattagaaagcgaggtgttaaaacgtatgtatccatcaataatg
tcggcggcagatctggagtgccctactgacattttctttgttgaagttgttccaatccct
gctacaaagtttagaccaatttctatgatgagtggtagaaaatacgagcatcctcagacg
tccaacttgctaagactgttaaaatgtaattatattgtgcaagagatactgtgggaaatg
gagaaagcttcagctaatacaaacactgaagagagtaccaaatactcaagggacgtcaac
cagattccagggaaaacgttggtagataaactgagtaatgccttaacaaggttacagtct
gctgctaatgctgtaattgacagtgatcttgataaactatctgatgatgtcaggccaggt
atcaaacaggtgattgagaagaaggagggattattcaggaagaacatgatgggtaaacgt
gtcaactacgctgcacgatcagttatcacccctgatccaaatataaatacaaatgagatt
ggaataccggaagtatttgcgaaggttttgtcctaccctcagccggtcacaccatggaat
gttcatgaactgagacaggccgttataaatggaccagatgtccatcctggggctactcat
gttattgatgagagtggttgggtaactagactagatgctagatttcctgataaacgtgag
gccttagctaaacagctgcttacaccaacagttactaaacataaaaccttaaatggtgtg
aaaaaggtacagagacatttaaagaatggtgatgtgttacttataaatagacagcccacg
ctacatagacctagtatacaggctcataaggcacgagtattaaagggagagaagacatta
cgacttcactatgccaactgtaaggcgtacaatgctgattttgatggagatgaaatgaat
gcacattttccacagaatgaaatagccagatcagaggcttataatctagctagtacagat
tttcagtaccttgtacctaaggacggcacacccctggcgggtctgttacaggatcacatg
gtgtcaggtgtctccctcactatcagaggaaggttctttacaaaagatgattattgtaga
ctagtctatggagctcttattgacaaaaatggaccagttaaaatgttaccaccttccatc
ataaaaccagtcaaattatggtcagggaaacaggtgttatctacagttgttctcaatgtt
ataccagatggtaagcctgctttatcacttgatggaagagctaaagttcctgagaagagt
tggataaaggttcagaagtctgattttgatgatccgttgaaatatatgagagagagtgag
gatgttattataagacaaggggaattactctgtggagttcttgataaagggcattatggt
ccatcaaactttggactgatccattgttgttatgagttatacagtggtgctgtagcagga
cagatgttgacatgttttggtcgattgtttatgaactttctccagtggcgagggtttacg
ttaggtgttgaggatatcctggttactaaacagggggacaaaaaaaggagaagacttatc
aagaaatcaccagcctgtggtgaagtgtcagccaagaaggcattagaacttgaccaggaa
tgtggggaggcggaactactgagtgcattaaagaatgcccactttaataaggaggagaga
cagatgagagagttggatcagaatatgaggagtcagaccaatactatacagaatgatatt
gtcaatgcttgtatgccaaatggtttagagaagttgtttccagataataatctacagttg
atggtacagtcaggagatcgga
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