Ruditapes philippinarum (Manila clam): 132730266
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Entry
132730266 CDS
T09557
Name
(RefSeq) beta-galactosidase-like isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00052
Galactose metabolism
rphi00511
Other glycan degradation
rphi00531
Glycosaminoglycan degradation
rphi00600
Sphingolipid metabolism
rphi00604
Glycosphingolipid biosynthesis - ganglio series
rphi01100
Metabolic pathways
rphi04142
Lysosome
Module
rphi_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
132730266
09103 Lipid metabolism
00600 Sphingolipid metabolism
132730266
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
132730266
00604 Glycosphingolipid biosynthesis - ganglio series
132730266
00511 Other glycan degradation
132730266
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
132730266
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132730266
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
132730266
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132730266
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
132730266
NCBI-ProteinID:
XP_060572131
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MADIANFKQTSLGVFLLTWGMTVCYEARSFSIDYDNNTFTMDGKPFRYISGSIHYSRVPY
QYWDDRLHKMAAAGLNAIQTYVPWNIHETVEGQYDFEGQQDIVKFLQTAQKYNLAVILRP
GPYICAEWEFGGLPAWLLKNPNIKVRTTDPDYLQPVERWMTKLYSVISPLLYKNGGPIIT
VQIENEYGSYPACDYTYLETLRDIARKNLGTDVVLFSTDGDGDGYLKCGTIEGVYATVDF
GITYNPQKNFDIQRHKEPKGPLVNSEYYTGWLDHWGQNHSTVPTAAVAKSLDLMLALGAN
VNMYMFEGGTNFGFWNGANYPYHPVPTSYDYDAPLTEAGDITDKYMQLRNTVAKYNPGAR
MKIPPSTPKVAYGKVQMIFVESIISYVDGTSKPIKSKYPLNMEDIDHYYGFILYEHQLKS
AVSHGKVDLSGARDRAYVMTKSGNIVSSVGVTERDSNNVTLTFSGKADDSLFILVENQAR
INYGGQMNNNLKGLISNVTLNGMNLTDWLIYPVNIDSDIMNRQLMMSSSKPTSALDSRLP
SVFTGKFEITDEPNDTYLDMSLWTKGQMFVNGVNIGRYWPSLGPQVRLFVPKYVLKEGSN
IIALIELERHPCDSMEHCYITFCDKPLINSTVSPGDISLQVHGDIDKTVYRGNLTYFETG
TKTQNTGNSKLSLFQMVYNIVMKIVESKWGVLLL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatagctaacttcaaacaaacgagtttaggtgtatttctcctaacatgggga
atgacagtttgctatgaggcacgttcatttagtattgactatgacaataacacattcaca
atggacggtaaacctttccgctacatatccggaagtatccattattcaagggtgccatac
cagtactgggatgatagattacacaaaatggcagctgcagggctaaatgctatacaaact
tatgttccctggaatatacatgaaactgtagaaggtcaatatgactttgaaggtcagcag
gatattgtaaagtttttacaaactgcacaaaaatacaatcttgctgtgattcttaggcca
ggaccttatatatgtgctgaatgggaatttggaggacttccagcctggctgttgaaaaat
ccaaatataaaagttaggactacagacccagattatttgcaacctgttgaaagatggatg
acaaagttgtactcagtaatctcccctttgttatataaaaatggaggtccaattatcaca
gtgcagatagaaaatgagtatggcagttacccagcttgtgattacacatatctggaaaca
ttacgtgatatagctaggaaaaacctaggcacggatgttgtattattttcaacagacggt
gatggtgatgggtatcttaaatgtggaactattgaaggagtttatgcaactgtagatttt
ggaatcacttataacccacagaagaacttcgatatacagagacataaggaacccaaaggt
cctttggtaaattctgagtattacactggttggttagaccattggggacaaaatcactcc
actgttcctacagcagcggtggccaaaagtctggatctaatgcttgcactaggagcaaat
gtcaacatgtacatgtttgaaggtggaacaaattttggtttctggaatggtgccaactac
ccatatcatccagtaccaacaagttatgattatgatgctccactcaccgaggcaggagat
atcactgacaaatatatgcagcttagaaacaccgttgctaagtataaccctggagctaga
atgaagatacccccttctacacctaaggttgcttatggcaaagtccagatgatatttgtt
gaaagtataatatcttatgttgatgggacatctaaaccaataaagtctaaatatccactg
aacatggaggatattgatcattattacgggtttattctgtatgaacatcaactaaagtca
gcagtgtcacatgggaaagttgatctatcaggtgctagagatagagcatatgtcatgaca
aagtctggaaacattgtgagttcagttggagtaacagagagggacagcaataatgtgacc
ttgacattcagtggtaaagcagacgacagtttgtttatacttgtagaaaatcaagctcga
ataaattatggaggacaaatgaacaataaccttaagggtttgatatcaaatgtcactctg
aatggaatgaatttgacagattggttgatttatcctgtcaacattgacagtgatatcatg
aacagacagttaatgatgtcatcaagtaaaccaacatctgcattagattcgagattacca
tccgtattcactggaaagtttgaaattacagatgagcctaatgatacatatttagatatg
tcattatggacaaagggtcagatgtttgtaaatggtgtaaatatcggcagatattggcca
agcttagggccacaagtgcgactctttgttcccaaatatgtgttaaaggaagggtcaaat
ataattgcattgatagaactggagagacacccatgtgacagtatggagcactgttatata
acattctgtgataaacctttaattaattccactgtaagtccaggagatatcagtttacag
gtacatggtgacattgataagacagtatacagaggaaatttaacatattttgaaactgga
actaaaacacaaaacactggaaatagcaaattgtctttattccaaatggtttacaacatt
gttatgaaaattgttgaaagcaaatggggagtacttctgttgtga
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