Ruditapes philippinarum (Manila clam): 132731757
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Entry
132731757 CDS
T09557
Name
(RefSeq) cyclin-dependent kinase 7-like isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03022
Basal transcription factors
rphi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132731757
09124 Replication and repair
03420 Nucleotide excision repair
132731757
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rphi01001
]
132731757
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132731757
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132731757
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132731757
Enzymes [BR:
rphi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
132731757
2.7.11.23 [RNA-polymerase]-subunit kinase
132731757
Protein kinases [BR:
rphi01001
]
Serine/threonine kinases: CMGC group
CDK family
132731757
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
132731757
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
132731757
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
132731757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Seadorna_VP7
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
132731757
NCBI-ProteinID:
XP_060573990
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MEEKLKRYEKIQFLGEGQFATVYKARDVMTDKIVAVKKIKLGTRQEAADGINRTALREIK
LLQELNHPNIIGLMDVFGQKSNVSLVFDFMDTDLEVIIKDNTIILTLAHIKTYMLQTLKG
LEYLHNNWILHRDMKPNNLLINKEGVLKLGDFGLAKFFGSPNRIYTHQVVTRWYRCPELL
FGARNYGTGVDIWAVGCILAELLLRIPFLPGDTDLDQLSKIFQCLGTPAKEEWPAMEHLP
DFVQFKPCVGTPLKEIFIAASDDLLDILQGMLTMDPLKRLTATQALKSDYFLNKPYPTPN
HLLPMIGNTKKEIMDQCKPSLKRKIDGESAGLAKRLVF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaattgaaacgctatgagaaaatacaatttcttggcgaaggacagtttgcc
actgtgtataaagccagagatgttatgactgacaagatagtggctgtcaaaaaaattaaa
cttggtacacgacaggaagcagctgatggtatcaacagaactgccctgagagaaatcaaa
cttctacaggaactaaaccatcctaatattattggtttgatggatgtgttcggccagaag
tctaatgttagtcttgtatttgatttcatggacactgatttagaggtaattatcaaagat
aacacaataatactcacgttggcacacatcaagacctacatgctacaaacactgaaaggg
ctggaatacttacacaataactggatattacacagagatatgaaaccaaataatttactc
atcaacaaagaaggtgtacttaaacttggtgattttggtcttgccaaattttttggttcc
ccaaacagaatatatactcatcaagtagttacaagatggtacagatgtccagagttgttg
tttggtgctagaaactatggaactggtgtggatatatgggcagttggatgtattttagca
gagcttctcctgagaataccttttcttcctggtgatacagatcttgatcaacttagtaaa
atatttcaatgccttggtacacctgcgaaggaggaatggcctgcaatggaacatctacca
gattttgtacagtttaaaccatgtgttggtaccccgttgaaggaaatttttatagccgcc
tctgatgatcttctagatattctacagggtatgctaaccatggatccattgaaacgtctt
actgcaacacaggcattaaagagtgattatttcctcaacaagccgtatccaacccccaac
catttgctgcctatgataggaaacacaaagaaagaaataatggaccaatgtaaacccagt
ctgaagagaaaaattgatggagaatctgcaggacttgcaaagagactagtgttttga
DBGET
integrated database retrieval system
