Ruditapes philippinarum (Manila clam): 132745718
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Entry
132745718 CDS
T09557
Name
(RefSeq) glutamate [NMDA] receptor subunit 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132745718
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132745718
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Glutamate (ionotropic)
132745718
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
CaM_bdg_C0
Peripla_BP_6
Ion_trans_2
Bromodomain
Motif
Other DBs
NCBI-GeneID:
132745718
NCBI-ProteinID:
XP_060590662
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MFILQYMVITVLFSLYSCENIHIGAVLSSKDNQYLLNDYVEKASARKTSKAIDLTFNASS
LLMDSNPVRSALSICDNLITKRVHVIIASHPPSSGQSPISVSYTCGYYGIPLIGIYARDS
AFSDKNVHPTFMRTVPPYFHQAYVWIDLLVHYDWKQVIFIHSMDEEGRSILSKFQALAEE
QEIKIEKSVKFSVGSTNFTDLLKELPQQQSRVILLSAGKEDAENIYRDASELDLTTETDF
VWLVTEEALLAINVPVGVIGLQLINGSNEAAHLEDSVSLIADTVTELFLGGNLTLTETPR
NCSRQVAAEDERWEQGVNLLESIKRQNIDGQTGRLSFNEEGDRLNPMYWIKNVHPAGTVV
VGYHGNRQGTEEKKLSFGNTPIEWPSGDTKKPKGIKISTHLRVITIEAKPFVYQEPIVNG
DMRKCNQEEGILCKHYNTTTQIETEHCCYGYCMKMLQMLAAKVNFTYDLYLSSNDSFGSF
KRVNNGTKKEWTGMVGELVNEQADLVVAPLTINPERAQAIDFSKPFKYQGLTILVKKEQK
DSSLASFLQPFQDTLWILVGLSVHVIALVLYLLDRFSPFGRFKLAKNDDTEEDALNLSSA
MWFAWGVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLDRPDASISG
IDDSRLRNPNENFRYATVKDSAVEMYFKRQVELSTMYRKMEEYNYNNADDAINDVKEGIK
LQAFIWDSSRLEYEDARHCDLVVAGELFGRSGLGVGLRKGSPWTHPISLAILELHEGGDM
EKLDNKWILIESTDCPERDHTPATLGLTNMAGVFMMVAGGIVAGVFLIFVEILYKRHRGL
KEKELELARNAADRWRGNIAKRKTLRQTMQNQRESLNRVNSIAAKPGVIDNNSTLNAGIH
RSSLKQPGSSNSPPILKPKVTIQSGRGVAPSPSIMLTNPAFSASNRSDFV
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgttcatactgcagtatatggttataacagttttattttcactttattcttgtgaaaat
atccatattggtgcagtattgagcagtaaagataaccagtacctgctaaatgactatgtg
gaaaaggcgtctgctagaaaaacaagcaaagctatagatctgaccttcaatgcttcatcc
ttactgatggacagtaaccctgttaggtctgcattatcaatctgtgataatttgataaca
aagagggtgcatgtgataattgcaagtcacccaccatctagtgggcagtctccaatatcg
gtgtcatatacatgcggttactatggcattccacttataggcatctatgcgagagatagt
gccttttcagacaagaacgtacatccaacttttatgaggacagttcccccgtactttcat
caggcatatgtatggatagatttactggttcactatgactggaaacaagtcatatttata
cacagtatggatgaggagggtcgttcaatactcagcaaattccaggcactcgcagaagaa
caagaaattaagatagagaagagtgtgaaattttctgtcggttccaccaatttcacagac
ctgttaaaagagcttccacagcaacagtcccgggtgatactactgtctgcaggaaaggaa
gatgctgaaaatatctaccgtgatgcaagcgagctcgatttgacgacagagactgacttt
gtttggcttgtgacagaagaagctttactagccatcaatgtaccagtaggtgtgattgga
ttacaactgataaatgggtctaatgaggcagcccatctagaagacagtgttagcctgatt
gctgatacagtcactgaactgttcctaggtggtaacttaacactaacagagacaccaaga
aactgtagtagacaagtcgccgctgaggatgaaagatgggaacagggcgttaatttactt
gagagtataaagagacagaatatagatggacagactgggcgtttaagttttaatgaggaa
ggtgatagactgaaccccatgtactggatcaagaatgtccatcctgcaggaaccgttgtt
gtaggttaccatggtaacagacaaggcacagaggaaaaaaagttatcctttggcaacaca
ccgattgagtggccatctggtgatacaaagaaacctaaaggaatcaaaatttcaacacat
ttaagagttatcactatagaagccaagccgtttgtgtatcaggagccaatcgtgaatggc
gacatgaggaagtgtaatcaggaggaagggatattgtgtaaacattacaacactacaaca
cagattgaaacagaacattgttgctatggatactgtatgaagatgcttcagatgttagca
gctaaagtcaactttacatatgacctgtaccttagttcaaatgattcattcggatccttt
aaaagggtaaataatggaacaaagaaagaatggacaggtatggttggtgaactggtcaat
gagcaagctgatctggttgttgccccacttactatcaaccctgagagggcccaagctata
gacttctctaaaccattcaaatatcaaggtcttactattcttgtgaaaaaggaacaaaaa
gattccagcttggcatccttcttacaaccattccaggatactttgtggattctagttggt
ctgtcagtgcatgtaattgctctagtgttatacctactggacaggtttagtccatttggt
cgcttcaagctcgccaagaatgatgacacagaagaagatgcccttaatctatccagcgct
atgtggtttgcctggggtgtacttctcaacagtggtataggagaaggaaccccaagaagt
ttcagtgcacgtgtacttggaatggtatgggcaggatttgctatgatcattgtagcttct
tacacagctaacctggcagctttccttgtgttagataggccagatgcttctatatctggt
attgatgattctagactgcgcaaccccaatgagaatttccgttatgccacggtgaaagat
agtgctgttgagatgtactttaagcgtcaggttgaattgtctaccatgtaccgtaagatg
gaggaatataattacaacaatgctgatgatgctatcaatgatgttaaagaaggaatcaag
cttcaagccttcatttgggactcgtctcgtctcgaatacgaggatgcccgtcactgtgac
cttgtcgtggcaggagagttgtttgggagatctgggctcggtgtgggactgaggaaagga
agtccatggacacaccctatttcattggccatcttagagttacatgaagggggagatatg
gagaagcttgataataaatggattttgattgagagtacagattgtccagagagagaccat
accccggctaccctaggactgacaaacatggctggagtgtttatgatggttgctggaggg
atagttgctggagtgttccttatctttgtggagattctctataagagacatcggggcttg
aaagagaaggagctagagctggctagaaatgctgctgatagatggaggggaaatattgct
aaacgtaagactttacgacagacaatgcagaaccagagggagagcttgaacagggtaaat
tccattgctgcaaaacctggagtgattgataataacagtacattaaatgctggaatacat
agatcaagtcttaaacagccaggatcaagcaactcgccacctatcctgaaacctaaggtt
accatacagagtggacgtggagttgcaccatctccaagtataatgctaaccaacccagct
ttctcggcttccaacagatctgattttgtgtaa
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