Ruditapes philippinarum (Manila clam): 132754010
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Entry
132754010 CDS
T09557
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4-like
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rphi03016
]
132754010
Enzymes [BR:
rphi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
132754010
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
132754010
Transfer RNA biogenesis [BR:
rphi03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
132754010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_4
Kelch_2
Kelch_1
Kelch_5
Kelch_6
Kelch_3
LCM
RAG2
DUF4881
Motif
Other DBs
NCBI-GeneID:
132754010
NCBI-ProteinID:
XP_060600582
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MSACDYKLLGADLSQINTLEAALKLCHIDFELPTLLLSECVLTYMTRRTASGVVRWANET
FANSVFVLYEQINPTDAFGLFMQNHFQTVGSPLKCINFFPTIQAQKDRFTQMGWRNLEVL
DMNEFYNMMLDDIERDRVEKLEMFDEYEEWHLKCAHYMVLLGYNGNCNQLLSGMIKLTDK
SLKAVKEYDGMVKVSRVTGTRVIRRFGHATAQLGTGQAVCVGGFGEQEGKHMRVTDIVLV
DSVTMAIKVINPCVDNRLIEVSRMHASLSTLQDGRLFLIGGRLSPMKLCSQVVAIEMNCG
KEKINEGEGFVCMNCGKNDDKSENMNSIKESNNGACIKLISVGKMCLNCSKMNISDSNIF
LKNSISEGKENSENKENFAKSEEKNVNLNSEAKNISVINEDHGNYKDVKVTVIEQKGDLP
CPRWRHTAVVYSNKEEEAIIVYGGRSQNVLALGDCYKFLPDSNAWIKVETTGLLPEAHQS
HSASIWNNHMVIAGGLNNDLEPLSSVYLLNLDTNMWSQLNCEINPRYSHTAHVIDNVLIL
IGGVSFSHDAPGIAMIHLPSGISAEFKLPAADKENLLMLHRHTSYIMDENTVLLLGGGGN
CFSFGTHLNSSPLLIDLSECFTTIKQTISNSEIKT
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcctgtgactacaagttgcttggagctgatctatcacagataaacacactggag
gcagcactgaagctgtgccatattgactttgaacttcctactctactcctctcagaatgt
gttctcacatacatgacacgcagaactgcatctggtgttgtgagatgggccaatgaaaca
tttgccaattctgtatttgttttatatgaacaaattaatcccacagatgcatttggatta
tttatgcaaaatcattttcaaactgtggggtctccactgaaatgtatcaacttcttcccc
accatacaagcacagaaggacaggttcactcaaatgggttggagaaatctagaagtatta
gacatgaatgagttttataacatgatgcttgatgacatcgagcgagacagggtggagaag
ttagagatgtttgacgagtacgaggaatggcatctaaaatgtgcacactatatggtgttg
ctaggttacaacggcaactgcaatcagttgttatctggaatgattaaactgacagataaa
agcttgaaagctgtgaaggaatatgatggtatggtaaaggtttcaagggtgactggtacc
cgagttatcaggaggtttggtcatgctacagctcagttgggaaccggtcaggcagtatgt
gttgggggttttggagagcaagaaggaaagcacatgagggttacagacattgtacttgtg
gattctgtaaccatggcaattaaagtgattaatccctgtgtagacaacagacttatcgaa
gtgagccggatgcatgccagtctctcaactcttcaagatggaaggctctttctgattggt
ggacgactttctcccatgaagctttgctctcaagtagtggcaatagaaatgaattgtggg
aaggaaaaaattaatgaaggtgaaggttttgtgtgtatgaattgtgggaaaaatgatgat
aaaagtgagaatatgaatagtattaaagaatcaaataatggagcttgcattaagttaatt
agtgttggaaaaatgtgtttgaattgttccaaaatgaatatttctgatagtaatattttt
ctgaagaattccattagtgaaggaaaagaaaattctgaaaataaggaaaattttgcaaaa
agtgaagaaaaaaatgtgaatttgaattctgaagcaaaaaatatatctgtgataaatgaa
gatcatgggaattataaagatgtgaaagtcactgtgatagagcaaaaaggagacctgcct
tgtccaagatggagacacactgctgttgtatatagtaacaaagaagaagaagctattata
gtttatggtggaagatctcaaaatgttcttgcactgggagattgttacaagtttctacct
gattcaaacgcctggatcaaggtggagacaacaggattgttgccagaggcacaccagtcc
cattctgcttctatttggaataaccacatggtcattgcagggggtctcaataatgacctt
gaaccattgtcatctgtttacctgctgaatctagacacaaatatgtggagtcaattgaat
tgtgaaataaatccaaggtattcccatacagcacatgtgattgacaatgtactgattttg
attggtggagtgagcttctcccatgatgcacctggtattgctatgatacatctcccatca
ggcatcagtgctgaatttaaacttcctgcagcagacaaggaaaacctgttgatgttacac
agacatacaagttacatcatggacgaaaatacagttctgttgctagggggaggtggcaac
tgtttctcattcggcacacatctgaactcttcaccactactcattgatttgagtgaatgt
tttacaactataaaacagactataagtaatagtgaaatcaaaacatga
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