Ruditapes philippinarum (Manila clam): 132758428
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Entry
132758428 CDS
T09557
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132758428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132758428
Enzymes [BR:
rphi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132758428
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
132758428
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
132758428
NCBI-ProteinID:
XP_060606086
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
MENLPNFKNLTASDYGRPKETQNQNLQDLVRPHIESFNCILHEGLGKIIENSLPVEFSLP
NGDRVALSLQDIIIGSPKVHEKAICRTAKVYPAECRSRGTSYKGPLQVQIGYTVNGQAGP
PIPKVLGQLPIMVKSEMCHLSKMSPKELIKHGEEAEEMGGYFIVNGIERLVRMIILPRRN
YPICLTRPGWRKRGTMFSDYGVMMRCVRSDHTATNMVLHYLNDGTAKLCFFYNQELFFAP
IVVILKGLMSLPDKYIYDELVKGKEDDSFYKGCVVAMLRQALNENLLTKQSVLKHIGSRF
RVKLSLPEWKTDEEVGQFLLQQCVCVHLTNDVDKFNLLVYMTRKLFDFAKGKCAAENGDS
PMFQEVLLGGHLFQMYLKEKLDGYLQIIKSVIDRQAKAYKGGSERYRLTPDALINALRYG
PDICKSFEYLVATGNLVTKSGLALMQNSGLTVVADKLNFMRYISHFRCIHRGAFFATMRT
TAVRKLLPEAWGFLCPVHTPDGSPCGLMNHATAMCQFQVFTFHEPIIKALDIVGVASLDN
PPCPIGECYTVMLDGRIVGYVSENMAPQVEQKLRVMKVKGLHKVPPTMEICLVKKTEYAS
QYPGLYLFTTPARMVRPVRNLALNEIEMIGTFEQVYMDICITQKEAYEGVTTHEELDGVS
MLSVAANLTPFSDFNQSPRNMYQCQMGKQTMGVPLHALKFRSDNKLYKIQTPQTPMVRPT
KYDYYDMDSYPLGTNAVVAVISYTGYDMEDAMVINKAAFQRGFGHATVYKTEIINLGDLI
KSGFDTTPLIFSSSETSKAYLAGEVDLDGLPYIGRCIKPNTVYYSYINTQSGAEKVNYYK
SQEPAYVEHIKLLGNDTGTSGKSKVAIMLRIDRNPIIGDKFASRHGQKGVCSMMYPVENL
PFTESGMTPDIIFNPHGYPSRMTIGMMIESMAGKSAASYGHCYDATPFQFSEDDPAIDHF
GNMLVKAGYNYHGTERFYSGIDGRELEASIFMGVVYYQRLRHMVSDKFQVRTT
NT seq
3038 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttacctaattttaagaatttgacagccagcgattatggcagaccaaaggaa
acacagaatcagaatcttcaagatcttgttaggccgcacattgaatctttcaactgtatt
ttacatgaaggattgggaaaaatcattgagaattcattacctgtggagttttccttgcca
aatggtgatcgtgtagctctaagccttcaggatattataattggcagtcccaaagttcat
gagaaggcaatatgcaggacagccaaggtctacccagcagagtgcagatctcgaggtaca
agttacaaaggcccactacaggtccagataggatacacagtgaatggacaggctgggccg
cccatacccaaagtcctgggtcagttacctatcatggttaagagtgagatgtgtcatctt
tccaagatgtcgccaaaagaactgatcaagcatggagaagaggcagaggaaatgggaggt
tattttattgtaaatggtatagagcgtcttgtaagaatgataatcttgcctaggagaaat
tatccgatatgtttgacacgaccaggttggagaaaacgtggcactatgttttcagactat
ggtgtcatgatgcgatgtgtcagatctgaccatactgctactaatatggtattgcactat
ctgaatgatggaacagccaaactttgtttcttctacaatcaagaactcttctttgctcct
attgttgtgattctgaagggtttgatgtcattaccagataaatatatatatgatgagttg
gtaaaaggaaaagaagatgactctttttataaaggatgtgtagtggctatgttacgtcaa
gcattgaacgagaatttgctcactaaacaatctgtgttaaaacatattggttcgaggttc
cgtgtgaaactctcgctaccggaatggaaaacagatgaagaagttggacagtttctttta
caacaatgtgtgtgtgtacatttaacaaacgatgttgataaattcaatctcctggtatac
atgaccagaaaattgtttgactttgcgaagggaaaatgtgctgctgaaaatggtgatagc
cccatgtttcaggaagttctgcttggaggtcatctatttcagatgtatctgaaggaaaaa
ctggatggatatttacaaataataaaatctgtgatagatagacaggcaaaggcttacaaa
ggagggagtgaaaggtacagacttacaccagatgccctaattaatgcattgagatatgga
cctgatatttgcaaatcatttgaatatctagtagccacagggaaccttgttactaaatct
ggactagcattgatgcagaattctggtttgacagttgtagcagacaaattaaactttatg
agatatatttctcatttccgttgtatacatagaggtgctttctttgccacaatgagaacc
actgctgtgagaaaacttctgcctgaagcttggggttttctatgtcctgtacacacccct
gatggttctccatgtggtctgatgaaccatgctacagctatgtgccagttccaggttttc
acatttcacgaaccaatcattaaagctcttgatatagtaggagtggcctcattggataat
ccaccttgtccaatcggagagtgttacacagttatgttggatgggaggattgtgggatat
gtcagtgagaatatggcaccgcaggtggaacaaaaattgcgtgttatgaaagttaaagga
ttgcataaggttccacctacaatggagatatgccttgtgaagaagacagaatacgccagt
cagtacccgggtttatacctgtttaccacgccagccagaatggttcgccctgtgaggaac
ctcgccttgaatgaaattgagatgataggaacgtttgaacaggtgtacatggacatttgt
ataactcagaaagaggcttacgaaggggtaacaacacatgaggaactggatggtgtcagt
atgttatcagtggctgccaatctaacaccgttttcagacttcaaccaaagtcccagaaac
atgtaccaatgtcagatgggtaagcagactatgggtgtaccattacatgccttaaagttc
agatcagataataagctgtataaaatacagaccccacagactccgatggtcagaccgacc
aagtatgactactatgacatggattcatacccacttggtacaaacgctgtggttgctgtt
atttcttatactggatacgacatggaagacgctatggttatcaacaaggcagcattccag
cgaggctttggtcatgccacagtatacaagactgagataataaatctaggagatttaatt
aaatcaggatttgataccacaccacttatattctcatcatcagaaactagcaaggcgtac
ctggcaggtgaagtagacttggacggtttaccttatataggcagatgtatcaagcctaat
acagtttattacagttacataaacacacaaagtggtgcagagaaagtaaactattacaag
agccaggaaccagcttatgtagaacatataaagctgttaggcaatgatacgggaaccagt
gggaaatcaaaagttgctatcatgcttagaattgatagaaatccaataattggtgacaag
tttgccagtagacatggccagaaaggagtctgcagtatgatgtatccagtagaaaaccta
ccatttacagagagtggaatgactccagatattatcttcaatccccatggttacccttct
agaatgacaataggtatgatgattgaatcaatggcaggaaagtctgcagcgtcatacgga
cattgctacgatgccacacccttccagttctcagaagatgatccggcaatagatcacttt
ggaaacatgttagttaaagctggctataactaccatggtacagagaggttctacagtggt
atagatggtcgggaactagaggccagtatcttcatgggtgttgtctactatcagaggctt
agacatatggtctctgacaaatttcaggtcagaaccac
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integrated database retrieval system
