Ruditapes philippinarum (Manila clam): 132760498
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Entry
132760498 CDS
T09557
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132760498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132760498
Enzymes [BR:
rphi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132760498
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
132760498
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
132760498
NCBI-ProteinID:
XP_060608469
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MGDLSNLNREKLAAPVKEIEEKWKLLPSFLKVKGLVKQHIDSFNYFVNIDIKEIMKANDK
ITSDADPNFYMKYLNIYVGMPDVEEGFNITKPISPHECRLRDMTYSAPITVDIEYTRGNQ
RIVRNNLPIGRMPIMLRSSNCVLNAKSPAEMAKLNECPMDPGGYFIVRGVEKVILIQEQL
SKNRMIVDTDVGRKGSIICSVTSSTHERKSKTDVLVKHEKYYLKHNSFSEDIPIAIVFKA
MGFECEQEFVQMIGSEEEVLAAVAPGLEECHKAGVFTHLQALKYIGNRIRQRRMWGGPKK
TKVDEARDVLHGVVLAHVPVVEWNFKLKAVYLALMVRRVIQAQLGMVKADDRDYYGNKRL
ELAGSLISLLFEDLFKKFNAELKKIADVTIPKPRAAQFDIVKHMRQDQITNGLVHAISSG
NWTIKRFKMDRAGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPS
DTPEGEACGLVKNLALMTHITTDHDEAPIIRLAFNLGVEDIQLLSGAEITSKLVYIVFLN
GNILGVIRNYKRLVYTFRLMRRAGYINEFVSICPSHSHRCVYISSDAGRVCRPYIIVSKG
KPLVKTKHIQELSQGFRCFEDFLKEGLVEYLDVNEENDCMISLYEKEITSNSTHLEIEPF
TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLCYPQAPLVKS
KTIELINFDKLPAGQNATVAVMSYSGYDIEDALVINKSSLDRGFGRCLVYRKQQCTLKRY
ANQTFDKVMGPMVDATTRKPVWRHSALDSDGICAPGEKIENKQVFVNKWMPTVTNTPLSS
TDRDKQPEYREVPIAYKGPEPSYIEKVMISSNPEEAFLVKMLLRQTRRPEIGDKFSSRHG
QKGVCGLIVPQSDMPFTDLGICPDIIMNPHGYPSRMTVGKLMELLGSKAGVLDGKFHYGT
AFGGDKVVDLSADLIRHGFNYLGKDYVTSGITGEPLEAYIYFGPIYYQKLKHMVVDKMHA
RAKGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCEQ
CGLLGYLGWCQYCKSSKNVSTLKMPYACKLLFQELLSMNIVPRLSLKRYNEV
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacctatcgaatttaaaccgggagaagttggctgctcctgtcaaggagattgag
gagaaatggaagttattgccatcattcctcaaggtgaaagggcttgtcaagcagcacata
gattccttcaactattttgtgaacattgatataaaggaaatcatgaaggctaatgataag
attacaagtgatgctgaccctaacttttacatgaaatatctgaacatttatgtgggcatg
ccagatgtggaggaaggatttaatatcaccaaaccaatatcccctcatgagtgtcgactg
agggacatgacatattcagcaccaataacagttgatattgaatacactagagggaaccag
cgtatagtcagaaataatctacctataggaaggatgcctattatgttacgaagttcaaat
tgtgttctgaatgctaagagtccagcagagatggccaaattaaatgaatgtccgatggat
cctggaggctactttattgttagaggtgtagagaaggtaatattgatacaagaacagttg
tccaagaatagaatgattgtagatactgatgttggtaggaagggaagtatcatctgttct
gttactagttcaactcatgagagaaaaagtaaaacagatgttcttgttaaacatgagaag
tattatcttaaacataactcattttccgaggacattccaatagcaattgtgtttaaagca
atggggtttgaatgtgagcaggagtttgtacagatgataggtagtgaggaggaggtgcta
gcggctgtagccccgggtctagaggagtgtcataaagcgggagtgtttactcatttacag
gctttgaaatatattgggaatcgtattcgacagagacgaatgtggggaggaccaaaaaag
acaaaggttgatgaagcaagggatgttttacatggtgtagttctagctcatgtaccagtt
gtagaatggaatttcaagttgaaagctgtatatctggcactgatggtacgtcgtgtaata
caagctcagttaggaatggtgaaggcagacgacagagattactatggtaacaagaggttg
gagttagctggctcacttatatcattactctttgaagatctctttaagaaattcaatgca
gagttgaagaagatagctgatgtgaccataccaaagccaagagcagcccagtttgatatt
gtaaaacatatgagacaagatcagataacaaatggactggttcatgctatatcttctggt
aattggacaattaagagatttaagatggatcgagcaggtgtaacacaggtactatcaaga
ttgtcctatatctcagctcttggaatgatgactaggatatcttcacagtttgagaaaaca
cgtaaagtaagtggtcctagatctctgcagccatctcaatggggaatgttgtgtccatca
gatacacctgagggagaggcttgtggtttagtcaagaatcttgcattgatgacacatatt
accacagaccatgatgaggccccaattatacgactggccttcaaccttggtgtagaggat
atacagttactgagtggtgcagaaatcaccagcaaattagtttatattgttttccttaat
ggtaatatacttggagtaatacgtaactacaagagacttgtctatacgttccgtctgatg
aggagggcgggatatataaatgagtttgtgtctatttgtcctagccattcccacagatgt
gtatatatctcatcagatgctggcagagtctgtagaccatatattatagtaagcaaaggg
aaaccactagtgaaaacaaagcacatacaagagttatctcagggtttccgatgttttgag
gactttctgaaagaaggtttagttgagtatttagatgtaaatgaagaaaatgactgcatg
atctcattatatgagaaagaaattacatcaaattcgacacatttagagattgaaccattc
accattctgggtgtatgtgctggtcttatcccgtaccctcatcataaccagtcacccagg
aatacataccagtgtgctatgggaaaacaagccatgggcacaattggttataaccagagg
aatagaattgacacattgatgtacctcctgtgttacccacaggctcctctagtcaagtca
aagactatagaattgatcaactttgacaagttaccagcaggtcagaatgctacagtagct
gttatgtcttacagtggctacgatattgaagatgctcttgttataaacaaatcttcacta
gaccggggatttggtagatgtttggtatacaggaagcagcaatgtaccctaaaacgatat
gctaatcaaacatttgataaggtcatgggaccaatggttgatgcaaccacacgtaaacca
gtttggcgacattctgctcttgactcagatggaatatgtgcaccaggtgagaaaatagaa
aacaagcaagtgtttgtgaacaaatggatgccaactgtcacaaacactcctctcagctcg
acagatcgtgacaagcaaccagagtacagggaggtacctatagcgtataaaggtccggaa
ccatcgtatatagagaaagtgatgatctcatccaatccagaagaagctttcttggtgaag
atgttattacgacagacccgtcgtcctgagattggtgacaagttcagtagcagacatgga
cagaaaggtgtatgtgggctgatagttcctcaatctgatatgcctttcactgatctgggt
atttgtccagatattatcatgaatccccatggttacccatctcgtatgacagttggtaaa
ttgatggaattacttggaagtaaagcaggtgtattggatggaaaatttcactatggaaca
gcttttggtggagataaggttgtagatttgtcggcagatctgataagacatggttttaat
tacctaggaaaagactatgtcacctctggtatcactggggaaccacttgaagcttatatt
tatttcgggcccatctactatcaaaagttaaagcacatggttgtagataaaatgcatgct
cgtgcaaaaggtccccgagctgtgttgactagacaaccgacggagggaagatctcgggat
ggaggtctacgtcttggtgaaatggaaagagattgtctgattggatatggtgctagtatg
ttattgttggaacgtctgatgatatcaagtgatgcatttgaagtagatgtttgtgaacag
tgtggtcttctaggctatctaggctggtgtcagtactgcaagtcatcgaagaatgtttca
acactgaaaatgccatatgcttgtaaactgttgttccaagaactgctatctatgaacatt
gtccctaggctatctctcaaacgatacaatgaagtgtag
DBGET
integrated database retrieval system
