Raoultella planticola: B1209_18420
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Entry
B1209_18420 CDS
T05298
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rpln
Raoultella planticola
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpln03009
]
B1209_18420 (rimO)
Enzymes [BR:
rpln01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
B1209_18420 (rimO)
Ribosome biogenesis [BR:
rpln03009
]
Prokaryotic type
ribosomal protein modification factors
B1209_18420 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Methyltransf_2
CLP1_P
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AUV54434
LinkDB
All DBs
Position
3813347..3814672
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AA seq
441 aa
AA seq
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MSNVTHQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPTYDNADMVIVNTCGFIDSAV
QESLEAIGEALKENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLQHVHHYTPKP
KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAKR
LTDAGVKELLVISQDTSAYGVDVKHRTGFHDGAPVKTSMVSLCEELAKLGIWVRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSADRQLARIKQWREICPDLTL
RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGATANELADQVPEEVKEERW
NRFMQLQQQISAERLQEKVGREITVLIDEVDEEGAIGRSMADAPEIDGAVYLNGETKVKP
GDVVRVKVEHADEYDLWGSRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtaacgcatcagccgaagatcggctttgtctctctgggctgcccgaaaaac
ctcgtggactcagaacgcatcctgaccgaactgcgtaccgaaggttatgacgtggtcccc
acctacgacaatgccgatatggttatcgtcaacacctgcggctttatcgacagcgccgtt
caggagtctctggaagccattggcgaagcgttaaaagaaaatggcaaagtgattgtgacc
ggctgcctgggcgcgaaagaagaccagattcgcgaagtgcatccgaaagtactggagata
accgggccgcacagctatgaacaggttctgcaacatgtccaccactatacgccgaagcct
aaacacaacccgttcctgagcctggtgccggaacagggcgtgaagctcacgccgcgtcat
tacgcctacctgaaaatttccgaaggctgtaaccatcgctgcaccttctgcattatcccg
tcgatgcgtggcgatctcgtcagccgtccaattggtgaagtgctgtccgaggccaaacgc
ctgaccgatgccggcgtcaaagagctgctggtcatctctcaggatacctccgcctacggt
gtcgatgtgaagcaccgtaccggcttccacgacggcgcgccggttaaaaccagcatggtc
agcctgtgcgaagagctggctaaactgggtatctgggtccgtctgcactacgtctacccg
tacccgcacgtcgatgacgtcattccactgatggcggaaggtaaaattctgccgtatctg
gatatcccgctgcagcatgccagcccgcgcattctgaaactgatgaaacgcccgggttct
gccgaccgtcagctggcgcgcattaagcagtggcgtgaaatctgccctgacctgaccctg
cgttcgaccttcatcgttggcttcccgggtgaaacggaagaagatttccagatgctgctc
gacttcctgaaagaggctcgccttgaccgcgttggctgctttaagtacagcccggtcgaa
ggggcgaccgctaacgagctggcggatcaggtgcctgaagaggtgaaagaagagcgctgg
aaccgctttatgcagctgcagcagcagatctccgccgaacgcctgcaggagaaggtcggc
cgcgagatcacggtgctgatcgatgaagtggacgaagaaggcgccattggccgcagtatg
gccgatgctccggaaatcgacggtgcggtctacctgaatggcgaaacgaaggtcaaacct
ggcgacgtagtccgtgtgaaagtcgaacacgccgacgaatacgatctgtggggcagccgg
gtttaa
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