Raoultella planticola: B1209_21295
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Entry
B1209_21295 CDS
T05298
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
rpln
Raoultella planticola
Pathway
rpln00730
Thiamine metabolism
rpln01100
Metabolic pathways
rpln01240
Biosynthesis of cofactors
rpln04122
Sulfur relay system
Module
rpln_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
rpln00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
B1209_21295
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
B1209_21295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpln03016
]
B1209_21295
Enzymes [BR:
rpln01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
B1209_21295
Transfer RNA biogenesis [BR:
rpln03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
B1209_21295
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Diphthami_syn_2
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AUV54891
UniProt:
A0A2X2G1J1
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Position
complement(4407424..4408872)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKNYDETLAVVRHWDHIEVRAKDENQR
PIIRDALTRIPGIHHILEVEDVPFTSLHDIFEKTLPLWREALEGKTFCVRVKRRGKHEFT
SIEVERYVGGGLNQHIETARVKLTDPDITVNLEIENDRLLLVKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMIRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISHDKEHIIDLAREIGTEDFARTMPEYCGVISKSPTVKAVKAKI
EAEEENFDFSILDKVVAEANNVDIRDIAQQTQQEVVEVETVTGFSPNDVILDIRSVDEQD
EKPLKVEGVDVVSLPFYKLSTQFGNLDQSKTWLLWCERGVMSRLQALYLREQGFENVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatccgtgagattg
cgcttcattaagatcttaaccgggaacattcgtaacgttctcaaaaactatgatgagacg
cttgccgtcgttcgtcattgggatcatatcgaagttcgcgcgaaagacgaaaatcagcgt
ccgattattcgcgatgcgctgacccgaatcccgggtatccaccatattctggaagtcgaa
gacgtcccgtttacctcactgcacgatatttttgagaaaacgttgccgctgtggcgtgaa
gcgctggaaggcaaaaccttctgcgtgcgcgtaaaacgtcgcggcaagcatgagtttacc
tctatcgaagtggaacgctacgtcggcggtggcctgaaccagcatatcgaaacggcgcgc
gtgaagctgactgacccggatattacggtcaatctggaaattgaaaacgatcgtctgctg
ctggtaaaagggcgctacgaagggatcggtggtttcccgatcggcactcaggaagatgtg
ctgtcgctgatttccggcggcttcgactccggcgtctccagctacatgctgatgcgtcgc
ggctgtcgcgtgcactactgcttctttaatcttggcggcgcggcgcatgaaattggcgtt
cgtcaggtggcgcactacctgtggaaccgcttcggcagctcgcaccgcgttcgtttcgtg
gcgattaacttcgaaccggtcgtgggggagatcctcgagaaagtcgacgatggccagatg
ggcgtggtgctgaagcgcatgatgatccgtgcggcgtcgaaagtagccgagcgctatggc
gtgcaggcgctggtgaccggcgaagcgctgggccaggtgtccagccagactctgaccaac
ctgcgtctgattgacaatgtctccgacaccctgattctgcgtccgctgatttcgcacgat
aaagagcacatcatcgacctggcccgtgaaatcggtaccgaagattttgcccgcaccatg
ccggagtattgcggcgtgatttcgaagagcccgaccgtgaaagcggtgaaggcgaagatt
gaagcagaagaagagaacttcgactttagcatcctcgataaagtggtggcggaagcgaat
aacgtggatattcgcgatatcgcccagcagactcagcaggaagtggtggaagttgaaacc
gtgaccggctttagcccgaacgacgtcattctggatattcgttccgtagacgaacaggat
gaaaagccgctgaaggttgaaggcgttgacgttgtgtcattaccgttctacaagctgagc
acccagttcggcaatctcgaccagagcaaaacctggctgctgtggtgcgaacgcggcgtg
atgagccgtctgcaggcgctgtacctgcgtgagcagggctttgagaacgtgaaggtttac
cgcccgtaa
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