Roseibium porphyridii: K1718_17725
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Entry
K1718_17725 CDS
T09906
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
rpop
Roseibium porphyridii
Pathway
rpop00190
Oxidative phosphorylation
rpop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpop00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
K1718_17725
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1718_17725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpop03019
]
K1718_17725
Enzymes [BR:
rpop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
K1718_17725
Messenger RNA biogenesis [BR:
rpop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K1718_17725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
GCFC
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
WFE87996
LinkDB
All DBs
Position
complement(3835335..3837557)
Genome browser
AA seq
740 aa
AA seq
DB search
MNEATDLSDILPSSQVVPDPRIKSDGPGSGQDLALSPARFMNRELSWLQFNLRVLEEAMN
PNHPLLERVRFLSISANNLDEFFMVRVAGLRGQQRAEVTNLSDDGLTPTEQLEKISEAVR
ELQASQQKIWGELGREIAEKGIEILQGDTLGESERAWLQDYFLKFVFPVLTPLAIDPAHP
FPFIPNLGFSIVFELVPVSGGRGMIALLRIPNQVDRFVKLPGGEDGAARFIAIEKVVSLF
IGRLFPGYEIRGKGAFRVIRDSDLEIEEEAEDLVRLFESALKRRRRGSVIRLEIQETTPP
ALREFVADALDVGESEIFLANGLLALNNLSQIVDLERSDLKFQPYTARFPERIREHGGDC
LAAIHQKDIIVHHPYESFDVVVQYLRQAARDPDVVAIKQTLYRTSNNSPIVKALAEAAEA
GKSVTALVELKARFDEAANIKWARDLERAGVQVVFGFIELKTHSKLSMVIKREHGQLKTY
CHIGTGNYHPITARIYEDLSFFTDDPGIAEDAARVFNFITGYAQPAELNHLMVSPVNLRE
RMLEMTEAEIEHARAGRPAQIWMKMNSLVDPEIIDALYRASQAGVQIDLIIRGICCLRPG
IEGLSENIRVKSIVGRFLEHSRIFCFGNGQGLPSPEAHVYIGSADLMPRNIDRRVEVLTP
LLTATVHEQVLDQIMVANLKDNQQSWRILSNGRHERIVPGANEDPFNAHQYFMTNPSLSG
RGKSLKSDRPKPFNERQKRG
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagccacggatctttcggacattctaccctcatctcaagtcgttcccgatccg
cgtatcaagtcggacggacctggaagcgggcaagatctggcgctttctcctgcaaggttc
atgaaccgcgaattgtcctggttgcagtttaacctgagggttctagaagaagccatgaat
cccaatcacccgttgcttgaacgggtgcgttttctgtcgatatcagccaacaatctcgac
gaattcttcatggtgcgcgttgccgggctgcgtggacagcaacgggccgaggtcaccaac
ctgtccgatgacggcctgacccccactgaacaacttgagaaaatcagcgaagctgttcgg
gaacttcaggcgtcacagcaaaagatctggggtgaattgggccgtgagatcgctgaaaaa
ggcatcgaaatccttcaaggagatacgctcggcgaaagcgaacgggcatggttgcaggac
tatttcctgaagttcgtgtttccggttctcacaccactggccatcgatccggcgcacccg
tttccattcattcccaacctcggtttctccatcgtcttcgagctggtcccagtttcgggc
ggccgcggcatgatcgcgcttctcagaattcccaatcaggtggacaggttcgtcaagctg
ccgggtggcgaggacggagcggcccggtttatcgctatcgaaaaagtcgttagccttttc
atcggccggcttttccctggctacgaaattcgtggcaagggtgcctttcgtgtcatccgt
gacagcgaccttgagatcgaggaagaagcagaagatctggtgcggcttttcgagagcgct
ctgaagcgtcgccgacgcggatctgtgatccggcttgagattcaggagacaacgccgccg
gccttgcgtgagtttgtggccgatgcacttgatgtcggtgaaagcgagatttttctggcc
aatgggttgctcgcactgaacaacctgtcgcagatcgtcgacctggagcgttctgacctg
aagtttcagccctatacagcgcgtttcccggaacgcattcgggagcatggtggcgattgt
cttgctgcaatccaccaaaaggacatcatcgttcaccacccgtatgagtcctttgacgtt
gtcgtgcaatatctgcgtcaggccgcgcgggacccggacgttgtcgccatcaagcagacg
ctctaccgaacgtccaacaattcgccgattgtcaaagccctggcggaagctgctgaggcc
ggaaagtccgtgacggctttggtggagctgaaggcgcgttttgacgaagcggccaatatc
aaatgggcgcgggatctggaacgggcaggggtgcaggtcgtgttcggctttatcgagctg
aagacacactcgaaactctcaatggtcatcaagcgtgaacatggacagctgaagacctac
tgccatatcgggacaggcaactatcatccgatcaccgcacgcatatacgaggatctgtcc
ttcttcaccgatgatcccggaattgccgaggacgcggcaagggtttttaatttcatcaca
gggtatgcccagcccgccgaactgaaccacctgatggtctcgcccgtgaatttgcgcgag
cgcatgctggaaatgaccgaggcggaaattgaacacgccagagcgggccgtccggcacaa
atctggatgaagatgaattctctggtcgatccggaaattatcgatgccctctaccgtgca
agtcaggcaggcgttcagatcgatctgatcattcgtggcatctgctgcctgcggccaggc
attgagggcctgtctgaaaatatccgggtcaagtcaatcgtcgggcgctttctggagcat
tcgcgtattttctgtttcggcaacggtcagggactgccttcgccagaagcacatgtctat
atcggatctgcggatctcatgccgcgcaatatcgaccggcgtgtcgaggtgttgacgcct
ttgttgacggcaaccgttcatgaacaggtgcttgaccagatcatggttgccaatctgaaa
gacaaccagcaaagctggcggattctttcgaacggacggcacgaacgcatcgtgccaggc
gcaaacgaagaccctttcaatgcccaccagtatttcatgaccaatccgtccctgtcgggg
cgcggcaagtcgttgaagagcgatcgtccaaagccgttcaatgaacggcaaaaacgagga
tag
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