Rhodococcus pseudokoreensis: JWS13_07100
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Entry
JWS13_07100 CDS
T08508
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk00750
Vitamin B6 metabolism
rpsk01100
Metabolic pathways
rpsk01240
Biosynthesis of cofactors
Module
rpsk_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
JWS13_07100 (pdxS)
Enzymes [BR:
rpsk01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
JWS13_07100 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NMO
NanE
IGPS
TetR_C_27
DHO_dh
Glu_synthase
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
QSE88403
LinkDB
All DBs
Position
complement(382314..383216)
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AA seq
300 aa
AA seq
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MSTPDTTPTTGTARVKRGMAEMLKGGVIMDVVTPDQAKIAEDAGAVAVMALERVPADIRA
QGGVSRMSDPDMIDGIISAVSIPVMAKARIGHFVEAQILQSLGVDYVDESEVLTPADYAN
HIDKWKFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRTIGGEIRRL
TSLSEDELYVAAKELQAPYDLVVEVAKAGKLPVTMFTAGGIATPADAAMMMQLGAEGVFV
GSGIFKSGNPAERAAAIVKATTFFDDPDVLAKVSRGLGEAMVGINVDDIPVPHRLAERGW
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacccccgacaccacccccaccaccggtacggcgcgcgtcaagcgcggcatggcc
gagatgttgaagggcggggtcatcatggacgtcgtcacccccgaccaggcgaagatcgcc
gaggacgccggtgccgtcgcggtgatggcactcgagcgggtgcccgctgacattcgcgcc
cagggcggcgtgtcccggatgagcgacccggacatgatcgacggcatcatctccgccgtg
tcgatcccggtgatggccaaggcccggatcgggcacttcgtcgaggcgcagatcctgcag
tcgctcggtgtcgactacgtcgacgagtccgaggtcctgacgccggccgactacgccaac
cacatcgacaagtggaagttcaccgttccgttcgtctgtggtgccaccaatctcggtgag
gcgctgcgccggatcaccgagggtgcggcgatgatccgttcgaagggtgaggccggcacc
ggtgacgtgtccaacgcgaccacccacatgcgcacgatcggcggggagatccgccggctg
acgtcgctgagcgaggacgagctgtacgtggcggccaaggagctgcaggccccgtacgac
ctggtcgtcgaggtcgccaaggccggcaagttgccggtcaccatgttcaccgccggtggc
atcgccaccccggcggacgcggcgatgatgatgcagctcggcgcggagggtgtgttcgtc
ggctcgggcatcttcaagtcgggcaacccggccgagcgggccgcggcgatcgtgaaggcg
accacgttcttcgacgacccggacgttctcgcgaaggtctcccgcgggctgggcgaggcg
atggtcggtatcaacgtcgacgacatccccgtcccgcaccggctcgccgaacgcggctgg
tga
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