Rhodococcus pseudokoreensis: JWS13_08665
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Entry
JWS13_08665 CDS
T08508
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk00190
Oxidative phosphorylation
rpsk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
JWS13_08665
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JWS13_08665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpsk03019
]
JWS13_08665
Enzymes [BR:
rpsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
JWS13_08665
Messenger RNA biogenesis [BR:
rpsk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JWS13_08665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QSE88675
LinkDB
All DBs
Position
694220..696424
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AA seq
734 aa
AA seq
DB search
MSNREALDHPTDVDGKNGTRDGIVTANPTNVPMAPPAATSALTSALTDGLPEDRYLNREL
SWLDFNARVLALAEDTSLPLLERAKFLAIFASNLDEFFMVRVAGLKRRDETGLSVRSADG
LSPREQLSLIATRTQEISEKAARVFLDSVRPALAAEGISIIGWDELTDDDRERLSVHFQD
QIFPVLTPLAVDHAHPFPYISGLSLNLAVTVKDALTGGEHFARVKVPDNVGRFVRVRRDE
TPSSIDAFLPLEDLISAHLDMLFPGMEIVEHHAFRITRNADFEVEEDRDEDLLQALEREL
ARRRFGSPVRLEVADDMTEHMLDLLLRELDVDPGDVIQVPGLLDLSCLWQVYAVDRPALK
DAPFVPATHPAFGERETPKSVFSTLRDGDVLVHHPYDSFSTSVQRFIEQAAADPQVLAIK
QTLYRTSGDSPIVDALITAAEAGKQVVALVEIKARFDEQANIKWARKLEHAGVHVVYGLV
GLKTHCKTCLVVRREGSTIRRYCHIGTGNYNPKTARLYEDIGLLTAAPEIGADLTDLFNS
LTGYSRKTQYRNLLVAPYGVRRGIIERIDGEIAHKLRGEDAGILLKANALVDEQVIDSLY
RASKAGVPVEIVVRGICALKPGVPGLSENIHVRSILGRFLEHSRVFHFRGADEFWIGSAD
MMHRNLDRRVEVMAQVKDPRLTAQIGDIVDSALDPVTRCWVLGPDGRWVPSPAHGEEVRD
HQEAMMRKRMGTGS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaccgagaagcactcgatcacccgaccgacgtcgacggaaagaacggaacccgc
gacgggatcgtgacggccaaccccacgaacgttccgatggctccccccgctgcgacgagt
gccctcacgagcgcgctgacggacgggctccccgaagatcgttacctcaaccgtgaactc
agttggctcgatttcaacgcccgggtgctcgccctcgccgaggacacgtcgctgccgctg
ctcgagcgcgccaagttcctcgccatcttcgcgtccaatctggacgaattcttcatggtc
cgggtcgcgggactcaagcgccgcgacgagaccggcctgtccgtgcgatccgccgacggc
ctctcccctcgcgagcaactctccctgatcgcgacccgcacccaggagatctcggagaag
gccgcgcgggtgttcctcgactccgttcgtcctgcgcttgccgccgaagggatctccatc
atcggatgggacgaactcaccgacgacgaccgcgagcgactgtcggtgcatttccaggac
cagatcttcccggtgctcaccccactcgccgtcgaccatgcccacccgttcccgtacatc
agcggcctgagtctcaacctcgccgtgacggtgaaggatgcgctcaccggtggcgaacac
tttgcgagggtcaaggttccggacaacgtgggacggttcgtccgcgtccgccgcgacgag
acaccgtcctccatcgacgcgttcctgcccctggaagatctgatctccgctcacctcgac
atgctgttcccgggcatggagatcgtggagcaccatgccttccgcatcacgcgcaacgcc
gatttcgaggtcgaggaagaccgcgacgaggatcttctgcaggccctcgagcgtgaattg
gcgcgccgccgcttcggttccccggtgcgactcgaggtcgcggacgacatgaccgagcac
atgctcgaccttctcctgcgcgaactcgacgtcgatcccggcgacgtcatccaggtgccc
ggactgctggatctgtcgtgcctctggcaggtgtacgcggtcgaccggcccgcgctcaag
gacgctccgttcgtgccggcaacgcatccggcgttcggcgagcgggaaacaccgaagagc
gtcttctcgaccctccgcgacggcgacgtcctggtccaccacccgtacgactcgttctcc
acgagcgtgcagcgcttcatcgagcaggccgccgccgaccctcaggtcctggcgatcaag
cagaccctctaccgcacgtccggcgactcccccatcgtcgacgcattgatcaccgccgcc
gaggcgggcaaacaggttgtggcactggtcgagatcaaggcgcggttcgacgagcaggcg
aacatcaagtgggcccgcaagctcgaacacgcgggtgtgcacgtggtgtacgggctggtc
gggctcaagacccactgcaagacgtgcctcgtcgtccgccgcgaagggtccaccatcagg
cgttactgccacatcggcaccggcaactacaacccgaagacggcccggctgtacgaagac
atcggtctgctcaccgcggcgccggagatcggcgccgacctcacggacctgttcaattcg
ctcaccggctactcgcggaagacgcagtatcgcaacctcctcgtcgcgccgtacggtgtg
cgccggggaatcatcgagcggatcgacggtgagattgcgcacaagttgcggggtgaagac
gccggaatcctcctgaaggccaacgccttggtcgacgaacaggtgatcgactcgctctat
cgcgcatccaaggccggtgtgcccgtcgagatcgtcgtgcgtggcatctgcgccctcaag
cccggagttcccggactgagcgagaacatccacgtccggtcgatcctcggccgtttcctc
gagcactcgcgagtcttccatttccgcggcgccgacgaattctggatcggcagcgcagac
atgatgcaccgcaacctcgaccgacgcgtcgaggtcatggcgcaggtgaaggatcctcgc
ctcaccgctcagatcggcgacatcgtcgactcggcgctcgatcccgtcacgcggtgctgg
gtgctcgggcccgacggccggtgggttccgtcgccggcacacggcgaggaggtacgcgac
caccaggaggccatgatgcgtaaacgaatgggcaccggatcctga
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