Rhodopseudomonas palustris TIE-1: Rpal_1198
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Entry
Rpal_1198 CDS
T00722
Name
(GenBank) Extradiol ring-cleavage dioxygenase LigAB LigA subunit
KO
K04100
protocatechuate 4,5-dioxygenase, alpha chain [EC:
1.13.11.8
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00362
Benzoate degradation
rpt00627
Aminobenzoate degradation
rpt01100
Metabolic pathways
rpt01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rpal_1198
00627 Aminobenzoate degradation
Rpal_1198
00624 Polycyclic aromatic hydrocarbon degradation
Rpal_1198
Enzymes [BR:
rpt01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
Rpal_1198
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Gene cluster
GFIT
Motif
Pfam:
LigA
Motif
Other DBs
NCBI-ProteinID:
ACE99737
UniProt:
B3QGZ0
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All DBs
Position
1268628..1269002
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AA seq
124 aa
AA seq
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MSEALAAGAGRAKREIFGTPIFGPESAQKGYALNKMCFSFNDAGARAAFVKDEAAYCARY
GLTAAQTEAILKRDLLKLLDEGGNAYYLAKFAGILGLNMQDIGALQTGMTVEQFKAKLLA
ARDN
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggcattggcggctggcgccgggcgcgccaagcgcgagattttcgggacgccg
atcttcggccccgagtcggcgcagaagggctacgctctcaacaagatgtgcttctcgttc
aacgacgccggcgcgcgcgccgcgttcgtcaaggacgaagctgcgtattgcgcgcgctat
ggcctgacagcggcgcagaccgaagcgatcctcaagcgcgatctgctcaagctgctcgac
gagggcggcaacgcctactacctcgccaaattcgccggcatcctcggcctcaacatgcag
gacatcggcgcgctgcagaccgggatgacggtcgagcagttcaaggcgaagctgctggcg
gcgcgggacaattga
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