Ralstonia pseudosolanacearum RS 476: CDC45_07880
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Entry
CDC45_07880 CDS
T05645
Symbol
ppk1
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Pathway
rpu00190
Oxidative phosphorylation
rpu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
CDC45_07880 (ppk1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDC45_07880 (ppk1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpu03019
]
CDC45_07880 (ppk1)
Enzymes [BR:
rpu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
CDC45_07880 (ppk1)
Messenger RNA biogenesis [BR:
rpu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CDC45_07880 (ppk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
AST27122
LinkDB
All DBs
Position
complement(1640127..1642301)
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AA seq
724 aa
AA seq
DB search
MSTLPTGDLLNREVGILEFNARVLAQAADPGVPLMERLKFICIVSSNLDEFFEIRVAGLK
EQMRDNASALTPDGLSVQQAFGVVTERVRQLVAQQYAMLQDEILPLLEKEGVFFHMTTNW
NEAQRAWCRGFFQRELVPILTPMALDPAHPFPRVLNKSLNFIIELSGKDAFGREAELAIV
QAPRALPRLVQMPPELSGYPYGFVLLSSFMQGFVHELFPQIDVHGCYQFRVTRNSDLFVS
EDEITDLREALQGELSTRHFGDAVRLEIAHDISPALARRLQQEFGLSEADCYRVKGPVNL
VRLLQVPDLVDRPMLKYPPHAPAAVKAVAASSSIFDAIRQGDILMHHPYESFMPVLELLQ
QAARDPDVVAIKQTVYRTGNESPVMEALIKAARNGKEVTVVVELLARFDEETNINWADQL
ESAGAHVVYGVVGHKCHAKMLLVVRREAAGGKAKTVKLRRYAHLGTGNYHPKTARLYTDF
GLMTADEAICEDVHHVFQLLTGTGAQVKLHHLWHSPFTMHANLIEHIRAEARAARAGKRA
RIIGKMNALLEPTIIDELYKASRAGVKIDLIVRGVCALRAGVPGLSEHISVRSLVGRFLE
HHRVYYFHAGGEEVVYLSSADWMDRNLFRRVEVAFPVLDRKLKARVIRESLQVHLRDNAS
AWVMQPNGSYVRRQTKGKHVRVSQMDLLNHFSPQAAAAAETAAAVAAATATEPPRKPPAE
ISAG
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacccttccgaccggcgacctgctcaatcgggaagtcggcatcctcgagttcaac
gcgcgcgtgctcgcacaggcggccgacccgggcgttccgctgatggagcgcttgaagttc
atctgcatcgtgtcgagcaatctggatgagttctttgagatccgcgtcgccgggctgaag
gaacagatgcgcgacaacgcctcggccctcacccccgacggcctgtcggtgcagcaggca
tttggcgtggtgacggagcgggtacggcagctggtcgcgcaacagtatgccatgctgcag
gacgaaatcctgccgctgctcgagaaggaaggcgtgttcttccacatgaccaccaactgg
aacgaagcccagcgcgcctggtgccgcggcttcttccagcgtgagctggtgcccatcctg
acgccgatggcgctggacccggcccaccccttcccgcgcgtgctcaacaagagcctgaac
ttcatcatcgaactgtcgggcaaggatgccttcgggcgcgaagccgaactggccatcgtg
caggcgccgcgcgccctgccccgcctggtgcagatgccgccggagctgtcggggtatccg
tacggcttcgtgctgctgtcgtcgttcatgcagggcttcgtgcacgagctgtttccgcag
atcgacgtgcatggctgctaccagttccgcgtcacgcgcaactccgacctgttcgtctcc
gaagacgaaatcaccgacctgcgcgaagcgctgcaaggcgaactgtcgacccggcacttc
ggcgatgcggtgcggctggagatcgcgcacgacatctcgcccgcgctggcgcgccggctg
cagcaggaattcggcctgtccgaagccgactgctaccgcgtcaaggggccggtgaacctg
gtgcgcctgctgcaggtgcccgacctggtggaccgcccgatgctgaagtacccgccgcat
gcgcccgccgccgtgaaggccgtggccgcgtcgtcgagcatcttcgatgccatccgccag
ggcgacatcctgatgcaccacccgtacgagagcttcatgcccgtgctggagctgctgcag
caggccgcgcgcgatccggacgtggtcgccatcaagcagaccgtgtaccgcaccggcaac
gaatccccggtgatggaggcgctgatcaaggccgcccgcaacggcaaggaagtgacggtg
gtggtcgagctgctggcgcgcttcgacgaagagaccaacatcaactgggccgaccagctc
gaatcggccggcgcccacgtggtgtacggcgtggtcggccacaaatgccacgccaagatg
ctgctggtggtgcgccgcgaggccgccggcggcaaggccaagaccgtcaagctgcgccgc
tatgcgcatctcggcaccggcaactaccacccgaagaccgcccggctctataccgacttc
ggcctgatgacggccgacgaagccatctgcgaagacgtccaccacgtgttccagctgctg
accggcaccggcgcccaggtgaagctgcaccacctgtggcactcgccgttcacgatgcac
gccaacctgatcgagcacatccgcgcggaagcgcgcgccgcccgtgccggcaagcgcgcg
cgcatcatcggcaagatgaacgcgctgctggagccgaccatcatcgacgagctctacaag
gcctcgcgcgcgggcgtcaagatcgacctgatcgtgcgcggcgtgtgcgcgctcagggcc
ggcgtgccggggctgtcggaacacatcagcgtgcgctcgctcgtcgggcgcttcctggag
catcaccgcgtctactacttccatgccggcggcgaggaagtcgtctatctgtccagcgcc
gactggatggaccgcaacctgttccgccgcgtcgaggtcgccttcccggtgctcgatcgc
aagctgaaggcgcgcgtgatccgcgaaagcctgcaggtgcacctgcgcgacaacgcctcg
gcctgggtgatgcagccgaacggctcgtacgtgcggcgccagaccaagggcaagcacgtg
cgcgtgagccagatggatctgctgaaccacttctcgccgcaagccgccgcggccgcggaa
acggccgccgccgtcgcagcggccaccgcgaccgagccgccgcgcaagccgcccgcggaa
atctccgcgggctga
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