Rhodopseudomonas palustris DX-1: Rpdx1_0415
Help
Entry
Rpdx1_0415 CDS
T01381
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00280
Valine, leucine and isoleucine degradation
rpx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Rpdx1_0415
Enzymes [BR:
rpx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
Rpdx1_0415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ADU42056
UniProt:
E6VJQ6
LinkDB
All DBs
Position
449861..451372
Genome browser
AA seq
503 aa
AA seq
DB search
MNANLFARLFDSLDDPHMLAIETAAGDKISYADLVARAGRVANVLVARGLKVGDRVAAQT
EKSVEALVLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKIVVCDPSRRDGVAAIAAK
VGATVETLGPDGQGSLTDAAAQASEAFATVERGDDDLAAILYTSGTTGRSKGAMLSHDNL
ASNSLTLVEFWRFTPDDVLIHALPIYHTHGLFVASNVTLFARGSMIFLPKFDPDRILDLM
ARATVLMGVPTFYTRLLQSPRLTKETTSHMRLFISGSAPLLADTHREWSAKTGHAVLERY
GMTETNMNTSNPYDGDRVPGAVGPALPGVSARVTDPETGRELPRGEIGMIEVKGPNVFKG
YWRMPEKTKSEFRDDGFFITGDLGKIDDRGYVHILGRGKDLVITGGFNVYPKEIESEIDA
MPGVVESAVIGVPHADFGEGVTAVVVRDKGASIDEAQVIKGLDGQLAKFKMPKKVLFVDD
LPRNTMGKVQKNVLRDTYKDIYK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaatctgttcgcccgcctgttcgacagcctcgacgacccgcacatgctcgcg
atcgaaaccgcggccggcgacaagatcagctacgccgatctggtggcgcgggcagggcgc
gtcgccaacgtgctggtggcgcgggggctgaaggtcggcgaccgtgttgcggcgcaaacc
gagaagtcggtcgaggcgctggtgctgtatctcgccacggtgcgggcaggcggcgtgtat
ctgccgctcaacaccgcctacacgctgcacgagctcgattacttcatcaccgacgccgag
ccgaagatcgtggtgtgcgatccgtccaggcgggacggcgtcgcggcgatcgccgccaag
gtcggcgccacggtggagacgctcgggccggacgggcagggctcgctcaccgacgcggcc
gcccaggccagcgaggcgttcgccacggtcgaacgcggcgacgacgatctcgcggcgatt
ctgtacacctcgggcaccaccggccgctccaagggcgcgatgctcagccacgacaatttg
gcgtcgaactcgctgacactggtggaattctggcgcttcacgccggacgacgtgctgatc
cacgcgctgccgatctatcacacccacgggctgttcgtggccagcaacgtcacgctgttc
gcgcgcggatcgatgatcttcctgccgaagttcgatcccgacaggatcctcgacctgatg
gcgcgcgctaccgtgctgatgggcgtgccgacgttctacacccgcctgctgcaaagcccg
cggctcaccaaggagaccaccagccatatgcggctgttcatctccggctcggcgccgctg
ctcgccgacacccaccgcgaatggtcggcgaagaccggccacgccgtgcttgaacgctac
ggcatgaccgaaaccaacatgaatacctcgaacccgtatgacggcgaccgcgtccccggc
gcggtcggcccggcgctgcccggcgtgtcggcgcgcgtgaccgatccggaaaccggccgc
gaattgccgcgtggcgagatcggcatgatcgaggtgaagggcccgaacgtgttcaagggc
tattggcggatgccggagaagaccaagtcggagttccgcgacgacggcttcttcatcacc
ggcgacctcggcaagatcgacgatcgcggttacgtccacatcctcggccgcggcaaggat
ctggtgatcaccggcggcttcaacgtctatccgaaggaaatcgagagcgagatcgacgcc
atgccgggcgtggtcgaatccgcggtgatcggcgtgccgcacgccgatttcggcgaaggc
gtcaccgccgtcgtggtgcgcgacaagggcgccagcatcgacgaagcgcaggtgatcaag
ggcctcgacggccagctcgccaagttcaagatgccgaagaaggttctgttcgtcgacgac
ctgccgcgcaacaccatgggcaaggtccagaagaacgtgctgcgcgacacctacaaggac
atttacaagtaa
DBGET
integrated database retrieval system
