Rhodopseudomonas palustris DX-1: Rpdx1_1169
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Entry
Rpdx1_1169 CDS
T01381
Name
(GenBank) Extradiol ring-cleavage dioxygenase class III protein subunit B
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00362
Benzoate degradation
rpx00627
Aminobenzoate degradation
rpx01100
Metabolic pathways
rpx01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rpdx1_1169
00627 Aminobenzoate degradation
Rpdx1_1169
00624 Polycyclic aromatic hydrocarbon degradation
Rpdx1_1169
Enzymes [BR:
rpx01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
Rpdx1_1169
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Gene cluster
GFIT
Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
ADU42795
UniProt:
E6VDG0
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All DBs
Position
1247536..1248393
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AA seq
285 aa
AA seq
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MATIIGGLAASHVPAIGGAMAKGLQKDPYWAPFFDGFDTPCRWLEAAKPDAAVVIYNDHG
LNFFLDKMPTFAIGAAPEYRNDDEGWGIPVMAPFKGDTRLSWHIIETLVESEFDPVTCQE
MLVDHAYSLPMELFLRDRAHDIPTVPVVVNTVQHPLPSLRRCFKLGQAIGRAIESYPEDL
KVVVIGTGGLSHQLEGQRAGFINTAFDRRCMDAMTGDIESLLGIDPHELVELAGSQGVEV
MNWVAMRGALLGDVHELHRNYHLPISNTASGIMLIENRPKLARAA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgatcatcggcggcctggccgcttcgcacgtccccgcgatcggcggggcgatg
gccaagggcctgcagaaggatccttactgggcgccgttcttcgacggcttcgacacgccg
tgccgctggctggaggccgccaagcccgacgccgcggtggtgatctacaacgaccacgga
ctcaacttcttcctcgacaagatgccgaccttcgcgatcggcgctgcgccggagtatcgc
aacgacgacgaaggctggggcatcccggtgatggcgccgttcaagggcgacactaggctg
tcgtggcacatcatcgagacgctggtggaatccgaattcgaccccgtcacctgccaggag
atgctggtcgaccacgcctacagcctgccgatggaactgttcctgcgtgaccgcgcccac
gacattccgaccgtgccggtggtggtcaacaccgtgcagcatccgctgccgtcgctgcgg
cgctgcttcaagctcggccaggcgatcggccgcgcgatcgagagctatccggaagacctg
aaagtggtggtgatcggcaccggcgggctgtcgcatcagctcgaaggccagcgcgccggc
ttcatcaacaccgcgttcgaccgccgctgcatggatgcgatgaccggggatatcgagagc
ctgctcggcatcgacccgcacgagctggtcgagctcgccggtagccagggcgtcgaggtg
atgaactgggtcgcgatgcgcggcgcccttctcggcgacgtccacgagctgcaccgcaat
tatcacctgccgatctccaacaccgcgtcgggaatcatgctgatcgagaaccggccgaag
ctggcgcgggcggcgtga
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