Rhodopseudomonas palustris DX-1: Rpdx1_4877
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Entry
Rpdx1_4877 CDS
T01381
Name
(GenBank) Extradiol ring-cleavage dioxygenase class III protein subunit B
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00362
Benzoate degradation
rpx00627
Aminobenzoate degradation
rpx01100
Metabolic pathways
rpx01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rpdx1_4877
00627 Aminobenzoate degradation
Rpdx1_4877
00624 Polycyclic aromatic hydrocarbon degradation
Rpdx1_4877
Enzymes [BR:
rpx01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
Rpdx1_4877
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Gene cluster
GFIT
Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
ADU46418
UniProt:
E6VFV9
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All DBs
Position
5243429..5244283
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AA seq
284 aa
AA seq
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MARITASVYTSHVPAIGAAIDMQKTGEDYWQPVFKGYEFSKQWLNDQKPDVIFLVFNDHA
TAFSLDLIPTFAIGTAAEYQPADEGWGPRPVPKVIGHPKLAAHIAQSVIQDDFDLTIVNK
MDVDHGLTVPLSLMCGEPQAWPCPVIPFAVNVVQYPVPSGRRCYMLGQAIGRAIRSYDED
INVQIWGTGGMSHQLQGPRAGLINREWDNAFLDQLINDPDGLSKKPHIDYVREAGSEGIE
LVMWLIARGAMSDVAGGPKPKVAHRFYHVPASNTAVGHLILENA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcccggatcaccgccagcgtttacacctcgcacgttccggcgatcggcgcggcgatc
gacatgcagaagaccggcgaagactattggcagccggtgttcaagggctacgagttctcc
aagcagtggctgaacgaccagaagcccgacgtgatcttcctggtgttcaacgatcacgcc
accgccttcagtctcgacctgattccgaccttcgcgatcggcaccgcggcggaatatcag
ccggccgacgaaggctgggggccgcgtccggtgccgaaggtgattggccatcccaagctc
gccgcccacatcgcccagtcggtgatccaggacgatttcgatctcaccatcgtcaacaag
atggacgtcgaccacggcctcaccgttccgctcagcctgatgtgcggcgagccgcaggcc
tggccctgcccggtgatcccgttcgccgtcaacgtcgtgcagtatccggtgccgtcgggc
cggcgctgctacatgctcggccaggcgatcggtcgcgccatccggtcctacgacgaagac
atcaacgtgcagatctggggcactggcggcatgagccaccagctccagggcccgcgcgcc
ggcctgatcaaccgggaatgggacaacgccttcctcgatcagctgatcaatgaccccgat
gggctgtcgaagaagccgcatatcgactacgtccgcgaggctggctccgaaggcatcgag
ctggtgatgtggctgatcgcgcgcggcgcgatgagcgatgtcgccggcggccccaaaccc
aaggtcgcccaccgtttctatcacgtcccggccagcaacactgcggtcggccacctcatt
ctggagaacgcctga
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