Rubrobacter radiotolerans: RradSPS_0194
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Entry
RradSPS_0194 CDS
T03080
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rrd
Rubrobacter radiotolerans
Pathway
rrd00500
Starch and sucrose metabolism
rrd01100
Metabolic pathways
rrd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RradSPS_0194
Enzymes [BR:
rrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RradSPS_0194
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
AHY45477
UniProt:
A0A023WZ30
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All DBs
Position
212926..215082
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AA seq
718 aa
AA seq
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MGDQAEKKSRSIVWPGRPYPLGATWDGSGVNFALFSENAQKVELCLFDESGEREVERIEL
AEKTDHVFHCYLPEAGPGQLYGYRVHGPYEPGNGHRFNPNKLLLDPYARDVHGTVDWEHD
HFGYEMGKDGDTFSEKDNASGMPKGRVVDTSFTWGEDRRPDVPWEDTIIYEVHVKGFTKL
HPEVPEPLRGTYAGLASPPAIEHLKKLGVTAVELLPVHLFLDDKVLVDQGLKNYWGYNTL
NFFVPDPRYSASGRVDEFKTTVKKLHEAGIEVILDVVYNHTAEGNHLGPTLSFRGIDNAS
YYRLTENDRRFYMDYTGTGNTLDTTHPRVLQLILDSLRYWVEEMHVDGFRFDLATTLGRE
EHLFERGSAFLDIVRQDPVVSQVKLIAEPWDVGEGGYQVGNFPAGWAEWNGKYRDEVRSY
WKGDGGMVNELASRLAGSSDIYERDGRRPYASINFVTAHDGFTLHDLVSYNEKHNEENGE
DNNDGDDHNRSWNCGAEGPTDDEEINALRRRQKRNFLATLLLSQGIPMLLYGDETGRTQN
GNNNAYCQDNETSWMTWDLSENDRKLMDFVRRVIRIKKNHPVFRRRKFFQGKKLPGTELR
DITWLTPDGKEMTDKEWNTSYARSLGLQMAGLLEDEYDPRGRLVRDDDFLLLLNAHHGPI
TFKLPDLPEDANWVASLDTGHAAGLASRGIFKPGDEYNVGPRSTVLMTSYARDPIPND
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
ttgggcgatcaggcagagaagaagagcagaagcatagtctggccgggcaggccgtatccg
ctcggggcgacgtgggacggctcgggggtgaacttcgcgctgttctccgagaacgcgcag
aaggtcgagctgtgcctcttcgacgagtcgggcgagcgcgaggtcgagcggatagagctt
gcggagaaaacggatcacgtctttcactgctacctccccgaggccggacccggacagctc
tacggctaccgggtgcacggtccatacgagcccgggaacgggcaccgcttcaacccgaac
aagcttcttctcgacccgtacgcgcgcgacgtccacggcaccgtggactgggagcacgac
cacttcggctacgagatgggcaaagacggcgataccttcagcgagaaggacaacgcctcc
ggcatgccaaaaggtcgcgtcgtggacacctcgtttacctggggtgaggaccgcaggccg
gacgtgccgtgggaggacaccataatctatgaggtccacgtcaagggcttcaccaagctc
caccccgaggtccccgaacccctgcgcggcacctacgccgggctcgcctccccgcccgca
atagagcacctcaagaagctcggcgtaacggcggtcgagctccttccggtccatctcttt
ctcgacgacaaggtgctcgtggatcagggcctgaaaaactactggggctacaacaccctc
aacttctttgtcccggacccgcgctactccgcaagcggccgggtagacgagttcaagacg
accgtgaagaagctccacgaggcgggaatagaggtcatcctcgacgtggtctacaaccac
accgccgaggggaaccacctcggacccacgctctccttccggggaatagacaacgcctcg
tactaccgcctgacggagaacgaccggcgcttctacatggactacaccgggaccggaaac
accctcgacacgacccacccgagggtgttgcagctaatcctcgactccctgaggtactgg
gtcgaggagatgcacgtcgacggcttccgcttcgacctcgcaacgactctggggcgcgag
gagcacctcttcgagcgcggttcagccttcttggacatcgttcgccaggaccccgtcgtg
agccaggtcaagcttatagccgagccctgggacgtcggggagggcggctatcaggtcggg
aacttccccgccgggtgggccgaatggaacggcaagtaccgcgacgaggtccgctcgtac
tggaagggcgacggcgggatggtaaacgagctcgcctcgcgccttgcaggctcctcggac
atctacgagcgcgacggccgcaggccctacgcgagcataaacttcgtcaccgcccacgac
ggcttcactcttcacgacctcgtctcctacaacgagaaacacaacgaagagaacggcgag
gacaacaacgacggcgacgaccacaaccgctcctggaactgcggcgcggagggtccgacc
gacgacgaggagataaacgccctcaggcgcaggcagaagcggaactttctcgccaccctc
ctcctctcgcagggcatcccgatgctactctacggcgacgagaccggccggacccagaac
ggcaataacaacgcatattgtcaggacaacgagacaagctggatgacgtgggacctgagc
gagaacgaccggaagctcatggacttcgtgcggcgtgtgatccgcataaagaagaaccat
cctgtcttccgcagacgcaagttctttcaggggaaaaagcttcccggcacggagcttagg
gacataacctggcttacgcccgacggcaaggagatgaccgacaaggagtggaacacgagc
tacgcccggtcgctcgggcttcagatggccgggcttctcgaagacgagtacgacccccgg
ggccggctcgtgcgcgacgatgactttctgcttcttctgaacgcccatcacgggccgatc
acgttcaagctcccggacctcccggaggacgcgaactgggtcgcctcgctcgacacgggg
cacgccgccgggctcgcctcgcgcggcatcttcaagcccggagacgagtacaacgtcggg
cctcgctcgacggtcctcatgaccagctacgcccgcgaccccattcccaacgactga
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