Rubrobacter radiotolerans: RradSPS_1804
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Entry
RradSPS_1804 CDS
T03080
Name
(GenBank) DNA polymerase family A
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rrd
Rubrobacter radiotolerans
Pathway
rrd03030
DNA replication
rrd03410
Base excision repair
rrd03420
Nucleotide excision repair
rrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RradSPS_1804
03410 Base excision repair
RradSPS_1804
03420 Nucleotide excision repair
RradSPS_1804
03440 Homologous recombination
RradSPS_1804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrd03032
]
RradSPS_1804
03400 DNA repair and recombination proteins [BR:
rrd03400
]
RradSPS_1804
Enzymes [BR:
rrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RradSPS_1804
DNA replication proteins [BR:
rrd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RradSPS_1804
DNA repair and recombination proteins [BR:
rrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RradSPS_1804
NER (nucleotide excision repair)
GGR (global genome repair) factors
RradSPS_1804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AHY47087
UniProt:
A0A023X3Q5
LinkDB
All DBs
Position
complement(1894169..1896703)
Genome browser
AA seq
844 aa
AA seq
DB search
MRIYLIDGYSLLYRAFYALPQSISTSGGLPTNALYGFTSMVLKLLDTEEPVGIGVVWDGG
MPEYRTEIFPEYKANRSAMPEELRMQLDHLDEILSAMNIHSVRVEGFEADDVIATLSKKV
PEGVELEIVTGDQDAMQLVEGAVKVARTTRGVSELKEYTRETVIEEYGVTPEQIPDYKGL
VGDSSDNIPGVRGIGPKGASKLLQEFGSVEEIYANLDAVKAKGTKSKLEEGRESAFLSKE
LATMRYDVPVEFDAEGLKFEGVSPAVDEVVRRYEFRSLGQRLSELPTVGGERLAPPERLK
VSVSEEPVDLSFEAVAVAPVGDGRWCVAETPTDVRLVEELPNRPLRVHDAKKNRVRDANF
DTYLAAYLIRPGLGSYEVEAMAEDRGLAGVDVEHADERVAAAAQRAAVVQALSPKLHEEL
EELGLARLYYDVELPLADVLADLEDIGMPVDADTLAEVGKEVDGRLATLEAEIHRMAGRP
FNIGSPKQLGEVLFEEMGIPPVRKTKTGYSTDAKVLNQLELQGHEIARLIVEWRELAKLK
GTYVEGLGKLIGPDGRIHTTLNQTTTTTGRISSDTPNLQNIPIRTETGQRIRDAFTSSPG
RKLLVVDYSQIELRILAHMTGEPTLVAAFRNGEDIHTRTAAEVFDIRPESVTPELRRRAK
MVNFGVLYGISGFGLATRLGLDRVNPAEADEYIRRYFESYPKVTEFIEETFREARERAER
EGSVPYVTTLFGRRRYVPELVDRKKNVQKLGERFAFNARVQGTAADIMKVAMIDLAPRVK
SLGADMIMQVHDELVFDVDEEAVRTVAELAAERMVAAYDLDPPLEVEAKVGERWGRGEPL
ALAR
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatttatcttatcgacggctactcgcttctgtaccgtgcgttctacgcgttgccg
cagagcatctcgacctcgggcgggctgcccacgaacgcgctctacgggtttacgagcatg
gtgttgaagctcctcgacacagaggagcccgtcgggatcggggtcgtgtgggacgggggg
atgcccgagtaccggaccgagatcttcccggagtacaaggcgaaccgctcggcgatgccc
gaagaactgaggatgcagctcgatcacctcgacgagatcctctcggcgatgaacatccac
tccgtgcgcgtcgaggggttcgaggccgacgatgtgatagcgacgctctccaagaaggtc
cccgaaggggtggagctagagatcgtcaccggagatcaggacgcgatgcagcttgtcgag
ggcgcggtcaaggtcgcccgcacgacgcgcggcgtctccgagctcaaggagtacacccgc
gagacggtcatcgaggagtacggggtaacgccggagcagatcccggactacaaaggtctc
gtcggcgactcctcggacaacatcccgggcgtgcgggggataggtccgaagggcgcgtcc
aagctcctacaggagttcggctcggtggaggagatctacgcgaacctcgacgcagtgaag
gcgaagggcacgaagagcaagctcgaagagggccgcgagagcgcgttcctctccaaagag
ctagccacgatgcgctacgacgtccccgtcgagttcgacgccgaagggttgaagttcgag
ggcgtctcgcccgccgtggacgaggttgtccggcgctacgagttccggagcctcggacag
aggctctccgagctcccgaccgtcggcggcgagcggctcgctccgcccgagcggctgaag
gtgagcgtctctgaggagccggtggacctgagcttcgaggccgtcgctgttgcgccggtc
ggggacgggcggtggtgcgtcgccgagaccccgaccgacgtgcgcctcgtggaggagctt
cccaaccggccgctgcgcgtccacgacgcaaaaaagaaccgcgtgagggacgccaacttc
gacacgtacctggctgcgtacctgatccgcccgggcctcggctcctacgaggtcgaggcg
atggccgaggaccgggggcttgccggagtggacgtcgagcacgccgacgagcgcgtagca
gcggccgcgcagcgagcggcggtcgtccaggcgctcagcccgaagctgcacgaagagctt
gaggagcttggcttggcgcggctctactacgacgtggagcttcccttagcagacgtgctc
gccgacctcgaagacatcgggatgccggtagacgccgacacgcttgcagaggtcggcaag
gaggtggacggacggctcgcaacgcttgaggccgagatccaccgcatggccggacggccc
ttcaacatcggctcgccgaagcagctcggggaggtgctcttcgaggagatgggcatacca
ccggtcagaaagacaaagaccggctactccaccgacgcaaaggtactcaaccagttagag
cttcagggacacgagatagcgcgcctgatcgtcgagtggcgcgaacttgcgaagctcaag
gggacctacgtcgagggactcgggaagcttataggccccgacggtcgcatccacaccacg
ctcaaccagaccacgacgacgacgggacgcatctccagcgacaccccgaacctgcagaac
atcccgatccggaccgagaccggccagcgcatccgcgacgccttcacctcctcgcccgga
cggaagctcctcgttgtcgactactcgcagatagagctcaggatactcgcgcacatgacc
ggcgagccgacgctcgttgcggcgttcaggaacggagaggacatccacacccgcaccgca
gcagaggtcttcgacatccgcccggagagcgtcacccccgagctgcgccggagggccaag
atggtcaacttcggggtgctctacggcatctccggcttcgggctcgccacccgtctcggg
ctggaccgggtgaacccggcggaggccgacgagtacatccggcgctacttcgagagctac
ccgaaggtcacggagtttatagaggagacgttccgcgaggcccgcgagcgcgccgaacgc
gaggggagcgtcccttacgtaaccacgctcttcggccgcaggcgatacgtcccggagctc
gtcgaccggaaaaagaacgtccagaagctcggagagcgcttcgcgttcaacgcccgggtc
caggggacggcggccgacataatgaaggttgccatgatcgacctcgcaccgcgcgtgaag
agcctcggggccgacatgatcatgcaggtccacgacgagctcgtcttcgacgttgacgag
gaggcggtacggaccgtcgcagagcttgcggccgagaggatggtcgccgcctacgacctc
gacccgccgcttgaggtggaggcgaaggtcggggagcggtggggacgcggcgagccgctc
gcgctggcgcgctag
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