Rhizobium ruizarguesonis: J3P73_01050
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Entry
J3P73_01050 CDS
T07270
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rrg
Rhizobium ruizarguesonis
Pathway
rrg03030
DNA replication
rrg03410
Base excision repair
rrg03420
Nucleotide excision repair
rrg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J3P73_01050 (polA)
03410 Base excision repair
J3P73_01050 (polA)
03420 Nucleotide excision repair
J3P73_01050 (polA)
03440 Homologous recombination
J3P73_01050 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rrg03032
]
J3P73_01050 (polA)
03400 DNA repair and recombination proteins [BR:
rrg03400
]
J3P73_01050 (polA)
Enzymes [BR:
rrg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J3P73_01050 (polA)
DNA replication proteins [BR:
rrg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J3P73_01050 (polA)
DNA repair and recombination proteins [BR:
rrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J3P73_01050 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J3P73_01050 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
IMS_HHH
HHH
NYN_YacP
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
QSZ01132
LinkDB
All DBs
Position
228692..231691
Genome browser
AA seq
999 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKTDGLPIGAVSGFCNMLWKLLRDARNTDVGVT
PTHLAVIFDYSAKTFRKDLYDAYKANRSAPPEELIPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEATGADVTVVSSDKDLMQLVSPNVHMYDSMKDKQIGIPDVIEKWGVPPE
KMVDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERATEIKQVKRRETILANI
DMARLSRDLVRLRTDVPLDLDLDALVLEPQNGPKLIGFLKTMEFTTLTRRVAEACDCDAS
AIEPAIVRIEWGEAARGPDLDAAEPEPVAGGIPDVSGESMPVPPRAKAKTAVEGAFSPAD
LAKARAEAFATLPFDHSAYVTIRDLTTLDRWIADARATGLVAFDTETTSLDAMQAELVGF
SLAIADNTADPTGTKIRAAYVPLVHKNGVGDLLGGGLAENQIPMGDALPRLKALLEDESV
LKVAQNLKYDYLLMKRYGIETRSFDDTMLISYVLDAGTGAHGMDPLSEKFLGHTPIPYKD
VAGSGKANVTFDLVDIDRATHYAAEDADVTLRLWLVLKPRLAAAGLTSVYERLERPLLPV
LARMEARGITVDRQILSRLSGELAQSAARLEDEIYVLAGERFNIGSPKQLGDILFGKMGL
SGGSKTKTGQWSTSAQVLEDLAAAGFELPRKIVDWRQVTKLKSTYTDALPGYVHPETKRV
HTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLISADYSQIELRVLA
HVAEIPQLTKAFEDGVDIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAFGLAN
QLSIERSEAGDYIKKYFERFPGIRDYMESRKAMARDKGYVETIFGRRINYPEIRSSNPSV
RAFNERAAINAPIQGSAADVIRRAMIKIEPALVEVGLADRVRMLLQVHDELIFEVEDGDV
EKAMPVIVSVMENATMPALEMRVPLRVDARAATNWDEAH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcacctcttcctagtcgatggttccggattcatcttccgggcgttt
catgcattgccgccgctgacccgcaagaccgacggcctgccgatcggcgccgtttccggt
ttctgcaacatgctgtggaaactgctgagggatgcacgcaataccgatgtcggcgtgacg
ccgacacatcttgccgtcatcttcgattattccgccaagacgtttcgcaaggatctctac
gacgcctacaaggcgaaccgctccgctccgccggaagagctcatcccgcaattcggcctt
ataagagaggcgacccgcgccttcaatctgccctgcatcgagaccgaaggcttcgaggcc
gacgacatcatcgccacctatgcccgccaggccgaagcgaccggcgccgatgtcaccgtc
gtctcctccgacaaggatctgatgcagctcgtcagccccaatgtccacatgtatgacagc
atgaaggacaagcagatcggcattcccgatgtcatcgagaaatggggcgtgccgccggaa
aagatggtcgacctgcaggcgatgaccggtgattccgtcgacaacgttcccggcattccc
ggcatcggcccgaaaaccgccgcccagctcctcgaggaatacggcgatctcgacaccctg
ctcgaacgcgccaccgagatcaaacaggtcaaacgccgcgagacgatcctcgccaatatc
gacatggccaggctctcgcgcgacctcgtgcggttgcgcaccgatgtgccgctcgatctc
gatctcgacgcgctggtgttggaaccgcagaacggcccgaagctgatcggcttcctcaag
acgatggaattcaccacgctgacgcgccgtgtcgccgaagcctgcgattgcgatgcgagc
gccatcgaaccggcgatcgttcgcatcgaatggggtgaggctgcccgcggcccggatctc
gatgcggccgaacctgagcccgttgctggcggcatccccgatgtttctggcgaatccatg
ccggtgccgccgcgtgcgaaagcgaagaccgctgtcgagggcgccttttcgcccgccgat
cttgccaaggcgcgggccgaagcctttgcgacgctgcccttcgatcattcggcctatgtc
acgatccgcgatctgacgacgctcgaccgctggatcgccgatgcgcgcgctaccggcctc
gttgctttcgataccgagaccacgtcgctggatgcgatgcaggccgagcttgtcggcttt
tcgctggcgatcgctgacaatacggccgatcccaccggcacgaagatccgcgccgcctat
gtgccgctcgtccacaagaacggcgtcggcgatctgctcggcggcggccttgccgaaaac
cagattcccatgggcgatgccctgccacggctgaaggcattgctggaagacgaatcggtt
ctcaaggtcgcccagaacctgaaatacgattacctgctgatgaagcgctacggcatcgag
accagaagtttcgacgacacgatgctgatctcctacgtgctcgacgccggcaccggcgcg
catggcatggacccgctctcggaaaagttcctcggccatacgccgatcccctacaaggac
gtggcgggcagcggcaaggcgaacgtcaccttcgatctggtcgatatcgaccgcgccacc
cattatgccgccgaagatgccgacgtgacgctgcgcctctggctggtgctgaagccgcgg
ctggcggcggcgggattgaccagcgtctatgaacggctggagcggccgctattgccggtg
ctggcgcgcatggaagcgcgcggcatcaccgtcgaccggcagatcctgtcgcgcctgtcc
ggcgagctggcccagagtgcagcaaggctggaggacgagatttacgtgctggctggcgag
cgtttcaatatcggttcgccgaagcagctgggcgatatcctgttcggcaagatgggcctt
tccggcggcagcaagacgaagacaggccaatggtccacctccgcccaggtgctcgaggat
ctggccgccgccggtttcgaattgccgcgcaagatcgtcgactggcgccaagttaccaag
ctgaaatccacctataccgacgcgcttccgggttacgttcaccccgagacaaagcgggtc
cacacctcctactcgctggcatcgacgaccacggggcgcctgtcctcgtcggagccgaac
ctgcagaacattccggtgcgcaccgcagaaggccgcaagatccgcaccgccttcatctcg
acgcctggccacaagctgatctccgccgactacagccagatcgaactgcgcgtgcttgcc
catgtggccgagatcccgcaattgaccaaggccttcgaagatggcgtcgacatccacgcc
atgaccgcgtcggaaatgttcggcgttccggtggaaggcatgccgggcgaggtgcgccgc
cgcgccaaggcgatcaatttcggcatcatctacggcatctcggccttcggccttgccaat
cagctttcgatcgagcgttcggaagccggcgactacatcaagaagtatttcgagcgtttc
cccggcatccgcgactatatggaaagccggaaggccatggcgcgcgacaagggttacgtc
gaaacgatcttcggtcgccgcatcaactatcccgaaatccgctcgtccaatccatccgta
cgcgcattcaacgaacgtgcggcgatcaatgcgcccatccagggctcggctgccgacgtc
atccgccgggcgatgatcaagatagagccggcgcttgttgaagtcggccttgccgatcgc
gtccgcatgctgctgcaggtgcacgatgaactcatcttcgaggtcgaggacggggatgtc
gaaaaggcgatgccggtcatcgtctcggtcatggaaaacgccaccatgccggcgctggaa
atgcgcgtgccgctgagggtcgatgcccgcgccgccaccaattgggacgaggcgcactaa
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