Rhizobium rhododendri: PR018_12180
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Entry
PR018_12180 CDS
T08971
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
rrho
Rhizobium rhododendri
Pathway
rrho00260
Glycine, serine and threonine metabolism
rrho01100
Metabolic pathways
Module
rrho_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rrho00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PR018_12180
Enzymes [BR:
rrho01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
PR018_12180
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
PR018_12180
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
NAD_binding_8
DAO
GIDA
Pyr_redox_3
AlaDh_PNT_C
HI0933_like
Thi4
Pyr_redox
FAD_binding_3
Fer2_BFD
NAD_binding_7
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
WFS21927
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Position
complement(2511785..2514778)
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AA seq
997 aa
AA seq
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MSGANRIPGAGRLTPAKTARFTFDGKTYTALEGDTAASALLANGVHLVGRSFKYHRPRGI
LSSGAEEPNALLDIARDSARRQPNVRASVQEVFDGMKVLSQNRFPSLGFDIGGINNFLSP
FFAAGFYYKTFMWPKAAWKNLYEPIIRRAAGLGVAPTEADPDHYASRFAHCDVLVVGGGI
AGLSAALAAAEAGAKVMLCDEQATVGGALHFDASVRIDGVDGYDWAQSVAARLKAMPNVE
VLTRTTAFGYYNHNFVALAERVTDHMARPDRKLPRERLIQVRARRVILATGAIERHMVFA
NNDRPGIMLASAAREYLNHYGVAVGARIGVYTAHDSAYEAAFDLKKAGVSVSAIVDCRTR
PGEAALAEARRLGIEVLAGHSVIDTSGRLRVSSMTVARNGGGAKRKIAVDALLMSAGWTP
SVHMFSQSRGKLRFDAEGQRFLPGTYAQDCLSIGACNGTDGLQQTIEESLAAGELMARAT
GATGDGKILLTGEQAFEWTGGMVGAAEGAGPDTSAKAFVDFQHDVCAKDIRLAVREGMHS
IEHIKRFTTNGMASDQGKLSNMHGLAIAAEVLDRPIPQVGLTTFRSPYTPVTYGTLVGHS
RGDHFDPARKTPLHAWEEARGAIFEDVGNWKRAWFYPRAGETMHQAVNRECRTVRAVAGI
FDASTLGKIEVVGPDAAEFLNLIYTNAWDTLKPGRCRYGIMLREDGFVYDDGVVGRLAED
RFHVTTTTGGAPRVMHHMEDYLQTEFPHLKVWLTSTTEQWAVIAVQGPKAREIIEPFVEG
IDLSNEAFPHMSVAEGKFCGVPTRLFRVSFTGDVGYEINVSADYGQSVLEAVWARAEKLG
ACAYGTETMHVLRAEKGYIIVGQDTDGTVTPDDAGLNWAVSKKKADFVGIRGLKRPDLVK
PGRKQLVGLITKDPNVVLEEGAQIVADPNEPKPMTMLGHVTSAYWSENCGRSIAFALVAG
GRERMGKTLYVPMPDKTIAVEVTDMVFFDKEGGRIHG
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgccaatcgtatcccgggcgccggccgcctgacgcccgccaagaccgcccgc
ttcacctttgacggcaagacctacaccgcgcttgagggcgatactgccgcgtcggcgctg
ctcgcaaacggcgtccacctggtcggccgctcgttcaaatatcaccggccgcgcggcatc
ctgtcgtcgggtgccgaggagccgaacgcgctgctcgacattgcgcgcgattcggcgcga
cgccagccgaatgtgcgggccagcgtgcaggaagtgttcgatggcatgaaggtgctttcg
cagaatcgctttccgtcgctcggcttcgacatcggcggcatcaacaatttcctgtcaccg
ttctttgccgccggtttttactacaagacctttatgtggccgaaggctgcctggaagaac
ctctatgagccgatcatccgccgtgctgcgggtctcggcgtggcgcctaccgaggccgat
ccggaccactatgccagccgatttgcccattgcgacgtgctggtggtcggcggcggcatt
gccggcctgtcggcagcgctcgctgccgccgaagcgggtgccaaggtcatgctctgcgac
gagcaggcgactgtcggtggcgcgctgcatttcgatgccagcgtgcggattgacggcgtc
gatggctatgactgggcgcagtccgtcgcggcacggttgaaggccatgccgaatgtcgag
gtgctgacccgcaccacggcttttggctactacaaccacaatttcgtggcgttggccgaa
cgcgtcaccgaccatatggcccgccctgaccgcaagctgccgcgcgaacggctgatccag
gttcgcgcccggcgcgtgatcctcgccaccggcgccatcgagcggcacatggtgtttgcc
aataacgaccggccgggcatcatgctggcatcggccgcgcgcgagtatctcaaccattac
ggtgtcgctgtcggcgccaggatcggcgtctacacggcccatgattcggcctatgaagcc
gccttcgacctcaaaaaggctggcgtgtctgtgtctgccatcgtcgattgccgcacccgg
cccggcgaggcggcgctggcggaagcccgccgtctcggcatcgaagttctcgcaggccat
tcggtcatcgatacttcgggccggcttcgggtatcgtcgatgacagttgcgcgcaacggc
ggcggcgccaagcgcaagattgccgtcgacgcgctcttgatgtcggctggctggaccccg
tcggtgcatatgttctcgcagtcgcgaggaaagctgaggttcgatgcagaggggcagcgc
ttcctgcccggcacctatgcgcaggattgcctgtccatcggcgcctgcaacggtaccgac
ggcctgcagcagactattgaggaatcgctggctgcaggcgaactgatggcgcgggccaca
ggtgccaccggtgacggcaagatcctgctgaccggcgaacaggccttcgagtggaccggc
ggcatggtcggcgctgccgaaggtgccggcccggatacctccgccaaggccttcgtcgat
ttccagcacgatgtatgcgccaaggacatccggcttgcggtgcgcgagggcatgcactcg
atagagcatatcaagcgcttcacgaccaatggcatggcatccgaccaaggcaagctgtcg
aacatgcacgggctggcaatcgccgccgaagtgcttgatcgccccattccgcaggtgggc
ctgacgaccttccgctcgccctatacgcctgtcacctacggcacgctggtcggccattcg
cgcggcgatcacttcgatcccgctcgcaagacgcctctgcacgcctgggaagaggcgcgc
ggagcgatcttcgaagatgtcggcaactggaagcgcgcctggttctatccgcgtgccggc
gagacgatgcaccaggcggtcaaccgcgagtgccgaaccgtgcgtgcagtggcgggcatc
ttcgatgcctcgacgctcggcaagatcgaggtggtcggccccgatgcggcggaattcctc
aacctcatctataccaacgcctgggatacgctgaagcccggccgctgccgatacggcatc
atgctgcgtgaagacggcttcgtctatgacgacggcgtcgtcgggcggctggccgaagac
cgcttccacgtgacgacgacgacaggcggtgcgccgcgcgtgatgcaccacatggaagac
tacctgcagacggaatttccacatctgaaggtgtggctgacatcgacaaccgagcaatgg
gcagtcatcgctgtccaaggcccgaaggcgcgcgagatcattgagcctttcgtcgagggc
atcgacctgtctaacgaggcttttccgcatatgagtgtcgcggaaggcaaattctgtggc
gttccgacacggctgttccgcgtctcgtttaccggcgatgtcggctacgagatcaatgtg
tcggcggattatggacagtctgtgctcgaagctgtctgggcccgtgcggagaaactcggt
gcctgcgcctacggcaccgagaccatgcacgtgctgcgcgccgagaagggttacatcatt
gttggccaggataccgacggcaccgttaccccagatgatgccggcctcaactgggcggtt
tcaaagaagaaggcggattttgtcggaatccgtggcctgaagcggccggatctcgtcaag
ccgggccgcaagcagttggtcgggctgattaccaaggatccgaacgtcgttctggaggag
ggcgcccagattgttgccgatccgaacgagcctaagccgatgactatgcttggccacgtg
acgtcggcctactggtcggaaaattgcggtcggtccatcgccttcgcgctggtggccggt
ggccgcgagcgcatgggcaaaacgctctatgtgccgatgcccgacaagacaatcgccgtc
gaggtgaccgacatggtgttctttgacaaggaaggaggccggatccatggttga
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