Rhinopithecus roxellana (golden snub-nosed monkey): 104667227
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Entry
104667227 CDS
T03989
Symbol
SPIB
Name
(RefSeq) transcription factor Spi-B isoform X2
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03030
DNA replication
rro03410
Base excision repair
rro03420
Nucleotide excision repair
rro03430
Mismatch repair
rro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104667227 (SPIB)
03410 Base excision repair
104667227 (SPIB)
03420 Nucleotide excision repair
104667227 (SPIB)
03430 Mismatch repair
104667227 (SPIB)
03440 Homologous recombination
104667227 (SPIB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rro03032
]
104667227 (SPIB)
03400 DNA repair and recombination proteins [BR:
rro03400
]
104667227 (SPIB)
Enzymes [BR:
rro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104667227 (SPIB)
DNA replication proteins [BR:
rro03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
104667227 (SPIB)
DNA repair and recombination proteins [BR:
rro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
104667227 (SPIB)
MMR (mismatch excision repair)
DNA polymerase delta complex
104667227 (SPIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
104667227
NCBI-ProteinID:
XP_010367843
LinkDB
All DBs
Position
12:110250100..110298400
Genome browser
AA seq
1126 aa
AA seq
DB search
MDGKRRPGPGPGVPPKRARGSLWDDDDAHQPSQFEEDLALMEEMEAEHRLQEQEEEELQS
VLEGIADGQFPPSAIDPRWCRPTPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPLSRG
SVPVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFRPEHLGDLQRELNLAISRDNRGGK
ELTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVTGLGTPS
FAPYEANVDFEIRFMVDTGIVGCNWLELPAGKYTLRLKKKVQGFPGQGLLPLLTHPCPQA
TQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLG
LRWGEQEPFLRLALTLRPCAPILGAKVQSYEKEEDLLQAWSTFICIMDPDVITGYNIQNF
DLPYLISRAQTLKVQTFPFLGRVAGLRSNIRESSFQSKQTGRRDTKVVSMVGRVQMDMLQ
VLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLR
LLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMPVVRSEGGEDY
TGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTP
TGDEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVY
GFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMC
RFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDTH
DRMDCKGLEAVRRDNCPLVANLVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRIDISQL
VITKELTRAASDYAGKQAHVELAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSED
PLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLMGKVGG
LLAFAKRRNCCIGCRTVLNHQGAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRC
QGSLHEDVICTSRDCPIFYMRKKVRKDLEDQEQLLRRFGPPGPEAW
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaagcggcggccaggcccaggtcccggggtgcccccaaagcgggcccgtggg
agcctctgggatgatgatgatgcacatcagccatcccaattcgaggaggacctggcactg
atggaggagatggaggcagagcacaggctgcaggagcaggaggaggaggaactgcagtca
gtcctagaggggattgcagatgggcagttcccaccgtcagccatagatcctcgctggtgt
cggcccacaccacccgccctggacccccagacagagccccttatcttccaacagctggag
attgaccattatgtgggcccagcgcagcctgtgcctggcgggcccccactgtcccgcggc
tccgtgcctgtgctccgcgccttcggggtcaccgatgagggggtctctgtctgctgccac
atccacggcttcgctccctacttctacaccccagcgccccctggtttcaggcccgagcac
ctgggtgacttgcagcgggagctaaacttggccatcagtcgggacaatcgcggggggaag
gagctgaccgggccggccgtgctggccgtggagctgtgctcccgagagagcatgtttggg
taccacgggcacggaccctccccattcctgcgcatcaccctggcactgccgcgccttgtg
gccccggcccgccgtctcctggaacagggcatccgtgtgacaggcctgggcacgcccagc
ttcgcgccctacgaggccaatgtcgactttgagatccggttcatggtggacacaggcatc
gtcggctgcaactggctggagctcccagccgggaaatacaccctgaggctgaagaagaag
gtgcagggcttcccagggcagggcctgctgccactgctgacccacccatgcccacaggct
acgcagtgccagctggaggcagatgtgctgtggtctgacgtggtcagtcacccaccggaa
gggccgtggcagcgcattgcacccttgcgcgtgctcagctttgatatcgagtgcgctggc
cgcaaaggcatcttccctgagcctgagcgggacccagtcatccagatctgctcgctaggc
ctgcgctggggggagcaggagcccttcctgcgcctggcgctcaccctgcggccctgtgcc
cctatcctgggcgccaaggtgcagagctacgagaaggaggaggacctgctacaggcctgg
tccaccttcatctgcatcatggaccccgacgtgatcaccggttacaacatccagaacttc
gaccttccatacctcatctctcgggcccagaccctcaaggtacaaacattccctttcctg
ggccgtgtggctggccttcgctccaacatccgggagtcgtcattccagtccaagcagacg
ggccggcgggacaccaaggtggtcagcatggtgggccgtgtgcagatggacatgctgcag
gtgctgctgcgggagtacaagctccgctcctacacgcttaatgccgtcagcttccacttc
ctgggcgagcagaaggaggacgtgcagcacagcatcatcaccgacctgcagaatgggaac
gaccagacccgccgccgcctagccgtgtactgcctgaaggacgcctatctgccgctgcgg
ctgctggagcggctcatggtgctggtgaacgccgtggagatggcgagggtcactggcgtg
cccctcagctacctgctcagccgtggtcagcaggtcaaggtcgtatcccagctgttgcgg
caggctatgcacgaggggctgctgatgcccgtggtgaggtcggagggtggcgaggactac
acgggagccactgtcatcgagcccctcaaagggtactacgacgtccccatcgccaccctg
gacttctcctcgctgtacccgtccatcatgatggcccacaacctgtgctacaccacgctc
ctgcgacccggggctgcgcagaaactgggcctgactgaggatcagttcatcaagacgccc
accggggacgagtttgtgaagacctcagtgcggaaggggctgctgccccagatcctggag
aacctgctcagtgcccggaagagggccaaggccgagctggccaaggagacagaccccctg
cggcgccaggtcctggatggacggcagctggcgctgaaggtgagcgccaactccgtatat
ggcttcaccggcgcccaggtgggcaagttgccatgcctggagatctcacagagcgtcacg
gggttcggacgtcagatgattgagaaaaccaagcaactggtggagtcaaagtacacagtg
gagaatggctacagcaccagcgccaaggtggtgtatggtgacaccgactccgtcatgtgc
cgattcggtgtgtcctcggtggctgaggcgatggctctggggcgagaggccgcggactgg
gtgtcaggtcacttcccgtcgcccatccggctcgagtttgagaaggtctacttcccatac
ctgcttatcagcaagaagcgctacgcgggcctgctcttctcctcccggcccgacacccat
gaccgcatggactgcaagggcctggaggccgtgcgcagggacaactgccccctcgtggcc
aacctggtcactgcctcactgcgccgcctgcttatcgaccgagaccccgagggcgcggtg
gcccatgcacaggacgtcatctcggacctgctgtgcaaccgcatcgacatctcccagctg
gtcatcaccaaggagctgacccgcgcggcctccgactatgccggcaagcaggcccacgtg
gagctggccgagaggatgaggaagcgggaccccgggagtgcgcccagcctgggcgaccgc
gtcccctacgtgatcatcagtgccgccaagggtgtggccgcctacatgaagtcggaggac
ccactgtttgtgctggagcacagcctgcccatcgacacgcagtactacctggagcagcag
ctggccaagcccctcctgcgcatcttcgagcccattctgggcgagggccgtgccgaggct
gtgctactgcggggggaccacacgcgctgcaaaacggtgctcatgggcaaggttggcggc
ctcctggccttcgccaaacgccgcaactgctgcatcggctgccgcacagtgctcaaccac
cagggagccgtgtgtgagttctgccagccccgggagtctgagctgtatcagaaggaggta
tcccatctgaatgccctggaggagcgcttctcgcgcctctggacacagtgccagcgctgc
cagggcagcctgcacgaggatgtcatctgcaccagccgggactgccccattttttacatg
cgcaagaaggtgcggaaggacctggaggaccaggagcagctcctgcggcgcttcgggccc
cctggccccgaggcctggtga
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integrated database retrieval system