KEGG   Rhinopithecus roxellana (golden snub-nosed monkey): 104667227
Entry
104667227         CDS       T03989                                 
Symbol
SPIB
Name
(RefSeq) transcription factor Spi-B isoform X2
  KO
K02327  DNA polymerase delta subunit 1 [EC:2.7.7.7]
Organism
rro  Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03030  DNA replication
rro03410  Base excision repair
rro03420  Nucleotide excision repair
rro03430  Mismatch repair
rro03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104667227 (SPIB)
   03410 Base excision repair
    104667227 (SPIB)
   03420 Nucleotide excision repair
    104667227 (SPIB)
   03430 Mismatch repair
    104667227 (SPIB)
   03440 Homologous recombination
    104667227 (SPIB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rro03032]
    104667227 (SPIB)
   03400 DNA repair and recombination proteins [BR:rro03400]
    104667227 (SPIB)
Enzymes [BR:rro01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     104667227 (SPIB)
DNA replication proteins [BR:rro03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    104667227 (SPIB)
DNA repair and recombination proteins [BR:rro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      104667227 (SPIB)
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     104667227 (SPIB)
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-C4pol DNA_pol_B_2
Other DBs
NCBI-GeneID: 104667227
NCBI-ProteinID: XP_010367843
LinkDB
Position
12:110250100..110298400
AA seq 1126 aa
MDGKRRPGPGPGVPPKRARGSLWDDDDAHQPSQFEEDLALMEEMEAEHRLQEQEEEELQS
VLEGIADGQFPPSAIDPRWCRPTPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPLSRG
SVPVLRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFRPEHLGDLQRELNLAISRDNRGGK
ELTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVTGLGTPS
FAPYEANVDFEIRFMVDTGIVGCNWLELPAGKYTLRLKKKVQGFPGQGLLPLLTHPCPQA
TQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLG
LRWGEQEPFLRLALTLRPCAPILGAKVQSYEKEEDLLQAWSTFICIMDPDVITGYNIQNF
DLPYLISRAQTLKVQTFPFLGRVAGLRSNIRESSFQSKQTGRRDTKVVSMVGRVQMDMLQ
VLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLR
LLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAMHEGLLMPVVRSEGGEDY
TGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTP
TGDEFVKTSVRKGLLPQILENLLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVY
GFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMC
RFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDTH
DRMDCKGLEAVRRDNCPLVANLVTASLRRLLIDRDPEGAVAHAQDVISDLLCNRIDISQL
VITKELTRAASDYAGKQAHVELAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSED
PLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLMGKVGG
LLAFAKRRNCCIGCRTVLNHQGAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRC
QGSLHEDVICTSRDCPIFYMRKKVRKDLEDQEQLLRRFGPPGPEAW
NT seq 3381 nt   +upstreamnt  +downstreamnt
atggatggcaagcggcggccaggcccaggtcccggggtgcccccaaagcgggcccgtggg
agcctctgggatgatgatgatgcacatcagccatcccaattcgaggaggacctggcactg
atggaggagatggaggcagagcacaggctgcaggagcaggaggaggaggaactgcagtca
gtcctagaggggattgcagatgggcagttcccaccgtcagccatagatcctcgctggtgt
cggcccacaccacccgccctggacccccagacagagccccttatcttccaacagctggag
attgaccattatgtgggcccagcgcagcctgtgcctggcgggcccccactgtcccgcggc
tccgtgcctgtgctccgcgccttcggggtcaccgatgagggggtctctgtctgctgccac
atccacggcttcgctccctacttctacaccccagcgccccctggtttcaggcccgagcac
ctgggtgacttgcagcgggagctaaacttggccatcagtcgggacaatcgcggggggaag
gagctgaccgggccggccgtgctggccgtggagctgtgctcccgagagagcatgtttggg
taccacgggcacggaccctccccattcctgcgcatcaccctggcactgccgcgccttgtg
gccccggcccgccgtctcctggaacagggcatccgtgtgacaggcctgggcacgcccagc
ttcgcgccctacgaggccaatgtcgactttgagatccggttcatggtggacacaggcatc
gtcggctgcaactggctggagctcccagccgggaaatacaccctgaggctgaagaagaag
gtgcagggcttcccagggcagggcctgctgccactgctgacccacccatgcccacaggct
acgcagtgccagctggaggcagatgtgctgtggtctgacgtggtcagtcacccaccggaa
gggccgtggcagcgcattgcacccttgcgcgtgctcagctttgatatcgagtgcgctggc
cgcaaaggcatcttccctgagcctgagcgggacccagtcatccagatctgctcgctaggc
ctgcgctggggggagcaggagcccttcctgcgcctggcgctcaccctgcggccctgtgcc
cctatcctgggcgccaaggtgcagagctacgagaaggaggaggacctgctacaggcctgg
tccaccttcatctgcatcatggaccccgacgtgatcaccggttacaacatccagaacttc
gaccttccatacctcatctctcgggcccagaccctcaaggtacaaacattccctttcctg
ggccgtgtggctggccttcgctccaacatccgggagtcgtcattccagtccaagcagacg
ggccggcgggacaccaaggtggtcagcatggtgggccgtgtgcagatggacatgctgcag
gtgctgctgcgggagtacaagctccgctcctacacgcttaatgccgtcagcttccacttc
ctgggcgagcagaaggaggacgtgcagcacagcatcatcaccgacctgcagaatgggaac
gaccagacccgccgccgcctagccgtgtactgcctgaaggacgcctatctgccgctgcgg
ctgctggagcggctcatggtgctggtgaacgccgtggagatggcgagggtcactggcgtg
cccctcagctacctgctcagccgtggtcagcaggtcaaggtcgtatcccagctgttgcgg
caggctatgcacgaggggctgctgatgcccgtggtgaggtcggagggtggcgaggactac
acgggagccactgtcatcgagcccctcaaagggtactacgacgtccccatcgccaccctg
gacttctcctcgctgtacccgtccatcatgatggcccacaacctgtgctacaccacgctc
ctgcgacccggggctgcgcagaaactgggcctgactgaggatcagttcatcaagacgccc
accggggacgagtttgtgaagacctcagtgcggaaggggctgctgccccagatcctggag
aacctgctcagtgcccggaagagggccaaggccgagctggccaaggagacagaccccctg
cggcgccaggtcctggatggacggcagctggcgctgaaggtgagcgccaactccgtatat
ggcttcaccggcgcccaggtgggcaagttgccatgcctggagatctcacagagcgtcacg
gggttcggacgtcagatgattgagaaaaccaagcaactggtggagtcaaagtacacagtg
gagaatggctacagcaccagcgccaaggtggtgtatggtgacaccgactccgtcatgtgc
cgattcggtgtgtcctcggtggctgaggcgatggctctggggcgagaggccgcggactgg
gtgtcaggtcacttcccgtcgcccatccggctcgagtttgagaaggtctacttcccatac
ctgcttatcagcaagaagcgctacgcgggcctgctcttctcctcccggcccgacacccat
gaccgcatggactgcaagggcctggaggccgtgcgcagggacaactgccccctcgtggcc
aacctggtcactgcctcactgcgccgcctgcttatcgaccgagaccccgagggcgcggtg
gcccatgcacaggacgtcatctcggacctgctgtgcaaccgcatcgacatctcccagctg
gtcatcaccaaggagctgacccgcgcggcctccgactatgccggcaagcaggcccacgtg
gagctggccgagaggatgaggaagcgggaccccgggagtgcgcccagcctgggcgaccgc
gtcccctacgtgatcatcagtgccgccaagggtgtggccgcctacatgaagtcggaggac
ccactgtttgtgctggagcacagcctgcccatcgacacgcagtactacctggagcagcag
ctggccaagcccctcctgcgcatcttcgagcccattctgggcgagggccgtgccgaggct
gtgctactgcggggggaccacacgcgctgcaaaacggtgctcatgggcaaggttggcggc
ctcctggccttcgccaaacgccgcaactgctgcatcggctgccgcacagtgctcaaccac
cagggagccgtgtgtgagttctgccagccccgggagtctgagctgtatcagaaggaggta
tcccatctgaatgccctggaggagcgcttctcgcgcctctggacacagtgccagcgctgc
cagggcagcctgcacgaggatgtcatctgcaccagccgggactgccccattttttacatg
cgcaagaaggtgcggaaggacctggaggaccaggagcagctcctgcggcgcttcgggccc
cctggccccgaggcctggtga

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