Rhodococcus rhodochrous: 4535765_02119
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Entry
4535765_02119 CDS
T05521
Symbol
pdxS
Name
(GenBank) pyridoxine biosynthesis protein
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
rrt
Rhodococcus rhodochrous
Pathway
rrt00750
Vitamin B6 metabolism
rrt01100
Metabolic pathways
rrt01240
Biosynthesis of cofactors
Module
rrt_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
4535765_02119 (pdxS)
Enzymes [BR:
rrt01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
4535765_02119 (pdxS)
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
IGPS
NMO
Glu_synthase
DHO_dh
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
SNV18284
LinkDB
All DBs
Position
1:2283720..2284622
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AA seq
300 aa
AA seq
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MTSPDTAPVTGTARVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRA
QGGVSRMSDPDMIDGIIEAVSIPVMAKARIGHFVEAQILQALGVDYIDESEVLTPADYEN
HIDKFAFTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRRIRQEIRRL
TSLPEDELYVAAKELQAPYDLVVEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFV
GSGIFKSGNPAQRAAAIVKATTFHDDPDVLAKVSRGLGEAMVGINVDEIPQPHRLAERGW
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagccccgataccgcccccgtcaccggcaccgcccgcgtcaagcgcggcatggcc
gagatgctcaagggcggggtgatcatggacgtggtgacccccgagcaggcgaagatcgcc
gaggacgccggcgcggtggcggtcatggccctcgaacgcgtgcccgccgacatccgcgcg
cagggcggcgtgtcgcgcatgagcgatcccgacatgatcgacggcatcatcgaggccgtc
tcgatccccgtcatggccaaggcgcgcatcggccacttcgtcgaggcgcagatcctgcag
gccctcggggtcgactacatcgacgagtcggaggtgctcacccccgccgactacgagaac
cacatcgacaagttcgcgttcaccgtgccgttcgtgtgcggcgccacgaatctcggtgag
gcactgcgccgtatcaacgagggtgcggcgatgatccgctcgaagggcgaggccggcacc
ggcgacgtctcgaacgccacgacccacatgcgccggatccgccaggagatccggcgcctg
acctcgcttcccgaggacgagctctacgtcgccgccaaggaattgcaggccccctacgac
ctcgtcgtcgaggtcgcccgcgccggcaagctgcccgtcaccctcttcaccgccggtggc
atcgccacccccgccgacgccgcgatgatgatgcagctcggggccgagggcgtgttcgtc
ggatccggaatcttcaagtcgggcaaccctgcccagcgtgcggccgcgatcgtcaaggcc
accaccttccacgacgatcccgacgtgctcgcgaaggtctcgcggggtctcggcgaggcg
atggtcggtatcaacgtcgacgagatcccgcagccgcaccggctcgccgaacgcggctgg
tga
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